Raphanus sativus (radish): 108861189
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Entry
108861189 CDS
T06014
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108861189
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108861189
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
108861189
NCBI-ProteinID:
XP_018490519
UniProt:
A0A6J0P0W6
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Position
5:complement(20883267..20885696)
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AA seq
497 aa
AA seq
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MTAEEQTIISSSGGYVQSLSATDHVDHRHEPEPFNPPLAKRKRNLPGNPDPEAEVIALSP
KTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPERSCVHH
NPTRALGDLTGIKKHFCRKHGEKKWKCGKCSKRYAVQSDWKAHSKTCGTREYRCDCGTIF
SRRDSFITHRAFCDALAEETARLNAASHLKSLTGNNLNYHYLMGTLIPSPQSPQSPPPSF
PFGAPQHHHHHFPITTTTTFDQLHHQDAMKPASSLSLWMGGNVNHHQVSNEDCTQPQSPQ
EDYNWVFGNANNSGELSDSLITHENINNFAHNENANAVTSLSVPSLFSNVDQIRQDANAA
VAAVANMSATALLQKAAQMGATSSTPTITNDQSAFLQNFTSKISDQRQIVEDGGSDKFFA
LFGSNSVGLMSNNGLDHETLNPRNSVTVVSRIDELQNYPLKRRRVENGDVLEGGQTRDFL
GVGVQTMCRSSSINGWI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaagaacagacaatcatctctagtagtggaggatatgtccaaagcttatca
gcaactgatcatgtcgatcatcgtcatgaacctgaaccctttaatcctcctcttgctaag
aggaagagaaacctccctggaaaccctgatccagaagctgaagtcatagctctatctcca
aagacacttatggccacaaaccgtttcctctgcgagatatgtggaaaaggttttcagaga
gaccagaatctacagcttcaccgtagaggacacaacctcccatggaagctaaagcagagg
acaagcaaagaaataaggaaacgagtgtatgtgtgtcctgagaggagctgcgtccatcac
aatccaacaagagcactcggggaccttaccggaatcaagaaacacttttgtcgtaaacat
ggcgagaagaagtggaagtgtgggaaatgctccaagagatatgcagtccaatcagattgg
aaggctcattcaaagacttgtgggactagagagtatagatgtgactgtggtactattttc
tccaggagagacagtttcattacacatagagcattttgtgacgccttagcagaagaaacc
gctaggctaaacgcagcttctcatctcaaaagcctcaccggtaataatcttaattaccat
tatcttatgggcacactcatcccatcaccacagtcaccacaatcaccaccaccgtcgttt
ccatttggagcaccgcaacatcaccaccaccatttccccatcacaacaaccaccaccttc
gatcagcttcatcatcaagacgccatgaaacctgcttcttcgctctccctatggatggga
ggaaatgtcaatcatcatcaggtgagcaacgaggactgtacgcagccgcaatcaccgcaa
gaggattataattgggtttttggaaacgcaaataatagcggcgagttaagcgattcactc
atcacacatgaaaatatcaataactttgcccataatgaaaacgcaaacgcggttacctct
ctttccgtgccttctctttttagcaacgtcgaccagatcagacaagacgcaaatgcagct
gttgcggcggttgcaaatatgtcggcaactgcgttacttcaaaaagcggctcaaatgggc
gcgacttcttctactccgacgatcaccaacgaccagtcagcgtttcttcagaattttacg
tcgaaaatctcggaccagaggcagattgtagaagatggtggcagtgacaagttcttcgct
ttgtttggatcgaacagtgttggtttgatgagtaacaatggtcttgatcacgagaccctg
aaccctagaaatagtgttacggtcgtttcgaggatagatgaattacagaattaccctttg
aagcgtagaagagttgagaatggggatgtattagaaggagggcaaactcgagatttcctt
ggagttggtgtacaaacaatgtgtcgttcatcttctatcaacggatggatttaa
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