Raphanus sativus (radish): 108861277
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Entry
108861277 CDS
T06014
Name
(RefSeq) cysteine desulfurase 1, chloroplastic
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00450
Selenocompound metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108861277
Enzymes [BR:
rsz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
108861277
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
108861277
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
108861277
NCBI-ProteinID:
XP_018490620
UniProt:
A0A6J0P1T3
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Position
1:3215212..3217917
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AA seq
463 aa
AA seq
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MEGVAMKLPSFKSLAPTAISVASTFSIRRSFSFARRSSSLSATITADSEPVSLGHRARKD
FRILHQEVNGSKLVYLDSAATSQKPAAVLEALQNYYEFYNSNVHRGIHYLSAKATDEFEL
ARKKVARFINASDAREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAEHHSCIVPWQ
IVSQKTGAVLKFVTLNEDEVPDIDMLREMISEKTKLVAVHHVSNVLASSLPVEEIVVWAH
DVGAKVLVDACQSVPHMVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLLAMPPFLG
GGEMISDVFLDHSTYAEPPSRFEAGTPAIGEAIALGAACDYLSDIGMPKIHEYEVELANY
LYEKLSSVPDVRIYGPRPSESVRRAALCSFNVEGLHPTDLATFLDQQHGVAIRSGHHCAQ
PLHRYLGVNASARASLYFYNTKEDVDSFIVALADTVSFFNSFK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtggctatgaaactcccgtctttcaaatccctagctcccaccgccatctcc
gtcgcctctaccttctccatacgacggagcttctccttcgctcgccgctcctcgtcgcta
tccgccaccatcaccgccgattctgaacccgtctctctcggccatcgcgctcgtaaagac
ttccgaattctacaccaggaagtgaatggctctaagcttgtgtacttggacagtgctgcg
acttctcagaagcctgctgctgtattggaagctttgcagaattactacgagttctataat
tcaaacgttcacagaggaatccactacttaagtgccaaggctacagatgaatttgagttg
gctaggaagaaagtagctcgtttcatcaatgcttccgatgctagagagattgttttcact
aggaatgcaactgaagccatcaatcttgttgcttattcgtggggtctttctaacctcaaa
ccaggggacgaggttatacttacagtggctgaacatcacagttgcattgttccttggcaa
attgtatctcaaaagactggagcggttctaaagtttgtgactttgaatgaagatgaagtc
ccggacatagacatgttgagagagatgatttctgaaaagacaaaactcgtggctgttcat
catgtatcaaatgttcttgcatcttctcttcctgttgaagagattgtggtctgggcacac
gatgttggagcgaaagttctggtggatgcttgtcaaagtgttccccacatggtggttgat
gtccagaagctaaacgctgatttcttagttgcgtcttctcacaagatgtgtggacctaca
ggcattgggttcttatatggtaaaagtgatcttctacttgccatgcctccattcttaggt
ggcggagaaatgatctcagatgtatttcttgatcattcgacttatgcagaacctccatcc
agatttgaagctggaacacctgcaattggtgaagcaattgcccttggagcagcatgcgat
tacttgtcagatattggcatgccgaaaatccatgaatatgaggtagagcttgctaactat
ctgtacgagaaactgtcttcagtgcctgatgttcggatatacggcccaaggccttctgaa
agtgttcgaagggcagctctttgttccttcaatgtggagggactccacccaactgatttg
gcaacctttcttgatcaacagcatggagttgcgataaggtcaggacaccactgcgcgcag
ccactccatcggtatcttggagtaaatgcaagtgcacgcgccagcctctacttttacaac
acaaaggaagacgttgactccttcatcgttgcacttgcagacactgtgagcttcttcaat
tctttcaaatag
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