Raphanus sativus (radish): 108861316
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Entry
108861316 CDS
T06014
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108861316
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108861316
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
108861316
NCBI-ProteinID:
XP_018490656
UniProt:
A0A6J0P290
LinkDB
All DBs
Position
5:839258..843914
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AA seq
1159 aa
AA seq
DB search
MASNNNNHFTNSRSNLSTNSDAAEAGRSQQQQQPVPPSVTFARRTSSGRYVNYSRDDLDS
ELGSVDFTNYTVHIPPTPDNQPMDPSISQKVEEQYVSSSLFTGGFNSVTRAHLMDKVIDS
ETSHPQMAGAKGSSCAVPGCDVKVMSDGRGQDLLPCECDFKICRDCFVDAVKAGGGMCPG
CKEPYRNTDLTDMADDNSGQQKQQRAMLPPPSGGGGSKMERRLSLMKSTKSGLMRSQTGD
FDHNRWLFETSGTYGYGNAFWTKDGNFGSDKDGNGGGQGMGPQDLMSRPWRPLTRKLQIP
AAVISPYRLLIFIRVVVLALFLMWRIKHKNQDAIWLWGMSVVCELWFAFSWLLDQLPKLC
PINRATDLNVLKEKFETPTPSNPTGKSDLPGLDMFVSTADPEKEPPLVTSNTILSILAAD
YPVEKLACYVSDDGGALLTFEAMAEAASFANIWVPFCRKHDIEPRNPDSYFNLKRDPYKN
KVKADFVKDRRKVKREYDEYKVRINGLPDSIRRRSDAYHAREEIKAMKQQRQNREDEIVE
PVKIPKATWMADGTHWPGTWLNSAPDHSRSDHAGIIQVMLKPPSDEPLHGVSEGFLDLTD
VDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALR
EGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGC
LFRRIALYGFDPPRSKEHNPGCCSCCFRRKKKKSRVPEENRSLRMGGDSDDDEEMNLSLV
PKKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDASTVAEAIAVISC
WYEDKTEWGTRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQ
VLRWATGSVEIFFSRNNAFLASPRMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSG
QFIVQTLNVTFLIYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVI
QGLLKVVAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMLPPITIMMVNLIAIAVGFS
RTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLIAITISLLW
VAINPPAGSTQIGGSFTFP
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaataataataatcatttcacaaacagccgatccaatctctccacaaactct
gacgctgctgaagccgggaggagccagcagcagcagcagcctgtgcctccctccgtgaca
tttgctcggagaacatcctctggtcgctacgtcaactactccagagatgatctcgacagc
gagctcgggagcgtcgatttcactaactacactgtccacatcccgccgactcctgataac
cagcccatggacccttccatctctcagaaggtggaggagcagtacgtgtcaagctccctg
ttcaccggaggtttcaacagcgtgacacgagctcatctcatggacaaagtgatcgactca
gagaccagccaccctcagatggcgggtgcgaaaggctcctcctgcgcggttcctggctgt
gacgtgaaggtgatgagtgatgggagagggcaagatcttctcccctgtgagtgtgacttc
aaaatctgtagggactgctttgttgacgctgtgaaagcgggaggtgggatgtgtccgggg
tgtaaggagccttacaggaacactgatctgactgatatggctgatgacaacagtgggcag
cagaagcagcagagggctatgcttcctccaccttctggtggtggtgggtcgaagatggag
agaagactgtcgctgatgaagtcgactaagtctggtttgatgaggagtcaaaccggtgat
tttgatcacaacaggtggttgtttgagacgagtgggacttatggttacggcaatgctttc
tggacaaaagatgggaactttggtagtgacaaggatgggaatggcggaggacaaggtatg
ggaccacaagatctgatgagcagaccgtggagaccgcttactaggaaactccagattcct
gcagctgttataagtccttacaggcttttgatatttatccgtgtagttgttcttgcattg
ttcttgatgtggaggattaaacacaaaaaccaagacgcaatatggctgtgggggatgtct
gtggtttgcgagctttggttcgccttttcttggcttcttgaccagcttcctaagctgtgt
cccattaacagagctactgatctcaacgttcttaaagagaagttcgaaacgcctacaccg
agcaacccgacaggaaaatctgatctccctggactagatatgtttgtgtcaacggcagat
ccggagaaagagccacctctcgtcacttccaacaccattctatccatcctcgctgccgac
taccctgtggaaaagctcgcttgctacgtctcagacgatggaggagcgcttctgacgttc
gaagccatggctgaggcagctagtttcgcaaacatatgggtccctttctgccgtaaacac
gacattgagccgaggaatccggattcgtattttaatcttaagagagatccttacaagaac
aaggtgaaggctgacttcgtcaaggataggaggaaggtgaagcgtgagtatgatgagtat
aaggttcggatcaacggcttgcctgactctatcaggagacgttctgatgcttatcacgcg
agggaagagattaaggcaatgaagcagcagagacagaacagagaggatgagattgtggag
ccggtcaagattcctaaagctacttggatggctgatggtactcactggcctggaacttgg
ttaaactctgctcctgatcattcccgtagtgaccatgctggtatcattcaggtgatgttg
aagcctccaagtgatgagccattgcatggagtatctgaagggttcttagatcttacagat
gtggacattcgtctccctcttctagtctacgtctcgcgtgagaaacgaccaggttatgac
cacaacaagaaagcaggagcaatgaacgctctcgtccgagcttcagcaatcatgtccaac
ggtccgttcatattgaatctcgactgtgatcattacatatacaactcccaggccttgaga
gaagggatgtgcttcatgatggaccgaggcggtgaccgtctctgctacgttcagttcccg
cagcggttcgaaggcatcgacccatctgatcgttacgcgaatcacaacactgtcttcttt
gacgtcaacatgagagctctcgatggtttgatgggtcctgtctacgtcggaacgggttgt
ctctttaggagaatcgccttgtacgggttcgatccgcctcggtctaaagaacacaatccc
ggatgctgtagctgttgcttccgtcgcaagaagaagaagagccgtgtccctgaagagaac
aggtctttgagaatgggtggtgactctgatgatgatgaggagatgaatctttctttggtt
cccaagaagttcggaaactccacgttccttatagattcgatccctgtcgccgagttccaa
ggccgtcctctcgctgatcacccagcagttcaaaacggacggcctccgggagctctcacc
atccctcgtgagcttctcgatgcgtcaacggttgcagaagctatagccgtcatctcgtgt
tggtacgaggacaaaaccgagtggggaactaggatcggttggatttacggatccgtcact
gaggacgttgtcaccggttacagaatgcataaccgtgggtggaagtcggtttactgcgtg
acgaaacgtgacgccttccgtggcacggctcctatcaacttgacggataggcttcaccag
gtgctgagatgggctactggctcggttgagatcttcttctcgagaaacaacgcgttttta
gctagcccgaggatgaagatcctccagagaatcgcttacttgaacgtcggtatttaccct
ttcacatcgatcttcctcatcgtctactgcttcctccctgcgctctcgctcttctcggga
cagttcatagtccaaacacttaacgtcacgttcctcatctaccttctgatcatctccatt
acgttgtgtttactagctctcctcgagatcaaatggtcaggaatctcattggaagaatgg
tggaggaacgagcagttctggctcattggaggaacaagcgctcatttagccgcggttatc
caggggctgctcaaggtagtggctggaattgagatctctttcacgctgacgtctaaatca
ggaggagatgacgtggacgacgagtttgcggatctctacatagtgaaatggacttcactc
atgctcccaccgatcacgatcatgatggtgaatcttatagctattgctgttgggttcagc
aggacgatatacagtgtgattccgcagtggagtaagttgataggaggagtgttctttagt
ttctgggtgttggctcatctttatccgtttgctaaagggcttatgggaagaagagggagg
actccgaccattgtttatgtttggtccggacttattgccatcaccatatctctgctttgg
gtggctatcaatccacctgctggttctactcaaattggaggatctttcacttttccatga
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