Raphanus sativus (radish): 108861329
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Entry
108861329 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108861329
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108861329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108861329
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108861329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
108861329
NCBI-ProteinID:
XP_018490671
UniProt:
A0A6J0P2A2
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Position
5:complement(9114107..9116267)
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AA seq
313 aa
AA seq
DB search
MANLPPSLSMGTPFGGPSTSVGAPAANKDRNLASAEQLVLDLSNPELRENALLELSKKRE
LFQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTR
MLFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLC
LRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAERFFAVGRVLGNMVQSLVEQPSPR
LLKHIIRCYLRLSDNPRACAALGSCLPDSLRDGTFSNCLREDQIARRWLQQLVHNVGVGR
VPSHQGGGFEHML
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctgcctccatctctctccatgggcactcctttcggtggtcccagcacgtcg
gtcggagctccggcggcgaacaaagatcgaaacttggcatcggcagagcagttggttctc
gatctcagcaatcctgaactcagagaaaatgctcttctcgagctttccaagaaaagagaa
ctatttcaggatttggcgcctctcttgtggaactctttcggtaccattgccgccttgtta
caggagatagtgtctatttactctgttcttgcacctccaaatctgactcctgctcagtcc
aaccgtgtttgcaactcactcgcccttcttcagtgcgtagcatctcattccgacacgagg
atgttatttctcaaggctcacatcccattgtacctttatcccttcctgaatacaacgagt
aagtcaagacctttcgaatacttgcgccttactagcttaggtgtcattggtgctcttgtc
aaggttgatgacacagaggtcattagcttccttctttcaactgaaattattcctctgtgc
ctccgcaccatggagatggggagtgagctgtccaaaactgttgcgacattcattgttcaa
aagatcttgttggatgacgtggggatggattacatctgcacaacagcagagcgttttttt
gctgttggtagagtgttgggaaatatggttcagtcactcgttgagcagccttctccacgc
cttttgaagcatatcattcgttgttacctccgtttatcagacaacccaagggcttgtgct
gcacttggaagctgtctccctgactcgctacgagatgggaccttcagcaattgtcttcgc
gaggatcaaatcgcgaggaggtggctgcaacagctggttcacaatgttggagttggtcga
gtcccatcacatcaaggtggaggatttgagcacatgctctga
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