Raphanus sativus (radish): 108861408
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Entry
108861408 CDS
T06014
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108861408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108861408
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108861408
Prokaryotic type
Archaeal type
TFB
108861408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
108861408
NCBI-ProteinID:
XP_018490766
UniProt:
A0A6J0P2I7
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All DBs
Position
5:complement(38129531..38131533)
Genome browser
AA seq
312 aa
AA seq
DB search
MSDAFCSDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVKKSEEF
DIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLPKIIPAWY
AKEEDLKNLQSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgttttgttcggactgtaagaaacacacggaggtcgtgttcgatcactcc
gccggcgacaccgtctgctcggagtgtggactcgtgctcgaatcccactcgatcgacgaa
acatcagagtggcgtaccttcgctaacgagtcaggagacaacgaccccgttcgcgtcggc
ggtccgacgaaccctcttctcgccgacggtggtctcaccaccgtcatttccaaacctaac
ggttcctctggggactttctctcgtcttcgcttggtcgttggcagaaccggggatcgaac
cctgatcgtgggcttattgttgcgttcaagacgatcgccaccatggctgataggttgggg
cttgtggcgaccatcaaggaccgagccaacgagatatataaaagagtagaggatcagaag
tcaagcagaggaaggaatcaggatgctcttttggctgcttgtttgtacattgcttgtcga
caagaggacaagccacgaacagtcaaggaaatatgttctgttgccaatggagctactaag
aaggagattggtcgtgcaaaagagtacatagtcaaacagttggggcttgaaacgggacaa
tctgttgaaatgggaactatccacgccggagacttcatgagacgtttttgctccaatctt
ggtatgactaaccaaacggtgaaggcggctcaagaatcagtgaagaagtcagaggagttc
gatataaggaggagtcccatatcgattgcagcagcggttatatacatcataactcagctc
tctgatgagaagaagcctcttcgagatatctcggtggcaactggagttgcagaaggaacc
ataagaaactcttacaaagatctatatcctcatcttcccaagatcataccagcttggtac
gctaaagaagaagatctcaagaaccttcaaagcccttga
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