Raphanus sativus (radish): 108861446
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Entry
108861446 CDS
T06014
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108861446
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108861446
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
108861446
NCBI-ProteinID:
XP_018490810
UniProt:
A0A6J0P2A9
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Position
5:19963726..19966281
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AA seq
602 aa
AA seq
DB search
MGVGGKFWDLVRPYGRNEGSDYLREKRVAVDLSFWIIQHETAVKGFALKPHLRLTFFRTI
NLFSKFGAYPVFVVDGTPSPLKSHTRISRFYRSSGIDTSSLQEGVVSVERNKQFCEWVTE
CVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGASSVIKSIKPNSTE
PFECYHMSDIEAGLGLKRRHLIAISLLVGNDFDSGGVSGIGLDKALRIVRAFSEDDILQR
LEDIGKGFKPAVSGGTKSVDVDDDDDGVESSSQMKRRLPHCSRCGHPGSKRSHFKSSCEH
CSSDSGCIKKPLEFTCECSFCTKDRELKEQKKTENWWIKVCDRIALGPDFPNRKIIQLYL
SDSFTEDGSSMSWGTPDTEMLVDCLVFNLHWDPCYVRKMLLPMLSTIYLREKARSSNTGN
PLLCDQYEFHSIKCMKTRYGHKSFVIRWRKPRSTSGLTPEKPIVVWEEDEEVVEEEGCVG
LLDGLNEPQVQDDNGECFLLTDECVGLVQSAFPEETEHFLQEKKLRESKKKNVCEGAASS
SMGAQRSITDFYRSTKAAAAVATPAQNIDTGGSSIASASVEKKRQATSGSFSKSVRRRLL
FG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgggaggaaagttctgggatttggtgagaccatatggtcgaaacgaaggtagt
gattatctgagagagaaacgggtggccgttgatctttccttctggatcattcagcatgaa
actgccgtcaagggttttgcccttaaacctcacctcaggctcaccttcttccgtactatc
aatctcttctccaagtttggagcgtacccagtattcgtggttgatggaacaccttcgccc
ttgaaatcccataccagaatctctaggttttaccgatcttctggaattgatacctcgagt
ctccaagagggcgtagtctccgttgagagaaataagcagttttgtgaatgggttaccgaa
tgtgtggagctacttaaattgctcggtatccctgtcctgaaagcaaatggtgaagctgaa
gctctctgtgctcagctcaatagccatggttttgttgatgcctgcattactcctgatagt
gatgctttcctctttggtgcttcctccgttatcaaatccatcaagcctaactccactgag
ccgttcgagtgctaccatatgtcagatatcgaagctggtctcggtctgaagcggagacac
ttgatagccatctctcttttggttggtaacgactttgattcaggtggtgtttctgggatt
ggtctcgataaggcacttcgcattgtccgtgccttctctgaagacgacattctccaaaga
ctagaggacattggaaaagggtttaaacctgcagtgagtggtggaaccaaatcagtggat
gttgatgatgatgatgatggtgtagaatcaagctcccagatgaaaagaagattgcctcac
tgttctcgctgtggacacccaggcagcaagagaagtcatttcaagtcctcttgtgagcac
tgcagctctgattccggttgcattaagaaaccgttggagtttacatgtgaatgctccttc
tgcaccaaggatcgggaattaaaggaacagaagaaaaccgagaattggtggatcaaagtc
tgcgataggattgctctaggcccagattttcccaacagaaagattatccaactctatcta
tccgacagtttcacagaagatgggtcttcaatgtcttggggaactccagatacggaaatg
ctagtggattgcttggttttcaacctgcactgggatccttgttatgttaggaaaatgttg
cttccgatgttgtcgaccatttatctaagagaaaaggcaagaagcagcaacacgggaaat
cccttgttatgcgaccagtacgagttccattcaatcaagtgcatgaaaactagatatggg
cataagtcatttgtgataaggtggagaaaacccagatctacaagtggtttgactccagag
aaaccgattgttgtatgggaagaagatgaagaagtggtggaagaggaggggtgtgttggt
ctcttagatgggttaaatgaaccacaagtgcaagatgataacggtgaatgcttcttgcta
actgatgaatgcgtaggacttgtccagtctgctttcccggaggagacagagcacttccta
caagaaaagaaactgcgagagtcgaaaaagaagaatgtttgtgaaggagcagcatcatca
tcaatgggtgcacaaagaagtataactgatttctaccgatcaacgaaagcagcagcagca
gtagcaacaccagctcaaaatatagacacaggggggagctcaatagcttctgcttctgtt
gaaaagaagagacaagcaactagtggtagcttttcaaagtctgtaaggcgtcgtcttttg
tttggatag
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