Raphanus sativus (radish): 108861463
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Entry
108861463 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108861463
04121 Ubiquitin system [BR:
rsz04121
]
108861463
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108861463
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108861463
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108861463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Rad50_zn_hook
CxC4
zf-Nse
zf-C3H2C3
DUF7815
zf-HC5HC2H
Zn_ribbon_6
DpnI
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
108861463
NCBI-ProteinID:
XP_018490830
UniProt:
A0A6J0P2Q2
LinkDB
All DBs
Position
5:25804987..25806149
Genome browser
AA seq
322 aa
AA seq
DB search
MSSGRSTHWCHRCQRGVYLRGPDSLCTYCGGGFVEEIDVPPPPPIDTLRPHRDVERGPTY
DLMEAFSAFMRSRLAERSHDRDITTRITSSGGGSESFSSIAPFLIFGGQANNTSVEALLN
TSPGIGITRGGNTNAGDYFYGPGLEELIEQLSSSGGTTTHHRGPPPAAKSSIDALPTVKI
TQKHLKSSDSHCPVCKDEFELKSEAKQMPCKHVYHSDCIVPWLVQHNTCPVCRKELPSSR
GSSSSTQGDQSRGGGGSRRRNPFSSLWPFRSSSSSRDSQNRRDTNSTAGAEEGGQSNYHH
QLQQQHEQQQSHMGYSGWPFDY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtggtcgaagcactcactggtgccacagatgccaacgcggtgtctacctacgc
ggtccagattccctctgtacctattgtggaggagggtttgtcgaggaaatcgatgtacca
ccaccaccacccattgatacgcttagaccccacagagatgttgaacgcggtccaacgtat
gatctcatggaagctttctcagctttcatgagaagccgcttagccgaaagaagccacgac
cgagatatcaccacaagaatcacctctagtggtggtggttcagaaagcttctcgagtata
gctcctttcttgatcttcggtggccaagctaataacacatcagtcgaagccttgctaaac
acctcacctggtatcggcatcactcgtggtggaaacaccaatgctggtgactacttctac
ggacctggtctcgaagaactgatcgagcagctttcctcgtctggggggactactactcac
catcgaggcccaccgcctgcggcgaaatcatctatcgacgcgttaccgacggtcaagatc
acgcagaagcatctcaagtcgtcggactctcactgtccggtttgcaaagacgagttcgag
ctcaagtcggaagcgaaacagatgccgtgtaaacatgtttatcattccgactgcatcgtc
ccgtggctggttcagcacaacacgtgcccggtttgtcgtaaagagttgccgtcgtcgaga
gggtcgtcttcgagcacacagggtgatcagagtagaggcggcggcgggagcaggagaagg
aaccctttctctagtctctggccgttccggtcgtcgtctagctcgagggatagccagaac
cggagagatacgaacagcacagcgggtgcagaagaaggagggcagtctaattaccatcac
cagctacaacaacaacatgagcaacaacagtcacatatgggttatagtggatggcctttt
gactattaa
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