Raphanus sativus (radish): 108861539
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Entry
108861539 CDS
T06014
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsz03012
]
108861539
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-3
108861539
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
Sigma70_r4
DUF2779
DUF4363
Motif
Other DBs
NCBI-GeneID:
108861539
NCBI-ProteinID:
XP_018490924
UniProt:
A0A6J0P281
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Position
5:complement(25496877..25500657)
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AA seq
896 aa
AA seq
DB search
MSSRFFAQGGSDSEDESDIEQEIQEVQNTDINNRYLQGGSDDDDDTDTKRVIKPTKDKRF
EEMTHTVEQMKNAMKINDWVSLQENFDKVNKQLEKVMRITEAVKPPTLYIKTLVMLEDFL
NEALANKEAKKKMSPSNSKALNAMRQKLKKNNKLYEDDINKYREAPEVEEENEPEDEDDD
DEEGESDFEDDDVSKGDVTDEEVDEPVDNRWETMLNKKDKQMEKLLSKDPKEITWDWVNQ
KFKEIMAARGRKGTARFDLVDQLTHLTKIAKTPAQKLEILFSVISAQFDVNPGLTGHMPI
KVWKKCVLNMLTILDILVKYTNIVVDDTIEPDENETSKPADYDGTIRVWGNLVAFIERID
TEFFKSLQSIDPHTREYVERLRDEPMLLALAQNIQDYFERMGDYKAAAKVALRRVESVYY
KPQEVYEAMRKLAELVEENEEAEDAEEESGPISSFIVVPEVVPRKPTFPESGRAMMDTLV
SLIYRNGDERTKARAMLCDIYHHALMDNFGTARDLLLMSHLQDNIQHMDISTQILFNRTM
AQLGLCAFRVGMITESHSCLSELYSGQRVRELLAQGVSQSRYHEKTPEQERMERRRQMPY
HMHINLELLEAVHLIGAMLLEVPNMAANSFEARRRVISKNFRRLLEISERQAFNAPPENV
RDHVMAATRALTKGDFQTAFDVLNSLDVWRMLKNRDSILDMVKARIKEEALRTYLFTYSS
SYESLSLEQLAKMFDVTEAHVHSIVSKMMINEELHASWDQPTRCIVFHEVQHSRLQSLAF
QLTEKLSVLAESNERAMEARTGGGGLDLSSRRRDNNQDYAAASGGGRWQDNNMSYGQGRQ
GNNRSGYGGRPGQPRDWSGQNRGGGYAARAGSGNRGGGMQMDGSTRMVSLNRGVRA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacgttttttcgcccagggtggtagtgacagcgaggatgagagcgatatcgag
caagagatccaggaggttcagaacacggacatcaacaaccgttacctccagggcggcagc
gacgacgatgacgacacggacaccaagcgtgtcatcaagccgaccaaggacaagcgtttc
gaggagatgacgcacaccgtcgagcagatgaagaacgctatgaagatcaacgattgggtc
agcctccaggagaatttcgacaaggtcaacaagcagctcgagaaggtcatgaggatcacg
gaggctgtcaagcctcctaccttgtacatcaagacgctcgttatgcttgaggatttcttg
aacgaggctctggctaataaggaagcgaagaagaagatgagtcctagcaactccaaggcg
ttgaacgcgatgaggcagaagctgaagaagaacaataagctgtacgaagatgatatcaac
aagtacagggaggctccggaagttgaggaggagaatgagccagaggatgaggatgatgac
gatgaggaaggcgagagtgattttgaggacgatgatgttagcaaaggggatgtgactgac
gaggaggttgatgagcctgttgataaccgatgggagactatgcttaacaagaaagataag
cagatggagaagctgcttagtaaagatcctaaggagatcacctgggactgggtcaaccag
aagtttaaggagattatggctgctcgtgggaggaaggggactgctcgttttgacttggtt
gatcagcttacacacttgaccaagattgccaagactcctgctcagaagctcgagatcttg
ttcagcgttatctcagctcagttcgatgtgaatccaggtctcaccggacatatgcctatc
aaggtctggaagaaatgcgtgctcaacatgctcaccatactggacattctcgtgaagtac
actaacatcgttgtggacgacacaatcgaacctgatgagaatgaaacttcgaagccagct
gattatgatggaactatccgtgtctgggggaatttggttgcgttcattgagaggatcgat
actgagtttttcaagagtttgcagtccattgaccctcacacccgtgagtatgttgagaga
ctgagagatgagcccatgttgttggcccttgctcagaacatccaggactactttgagcgg
atgggtgattacaaagctgctgctaaggtagccttgagacgagttgagtcagtatattac
aagccccaggaagtttatgaagctatgaggaagctggctgagttggttgaagaaaatgaa
gaagctgaggatgccgaagaggaaagtggacctatttcttcattcattgttgttcctgag
gttgttccccgtaagcctacgttcccggagagtggccgagcaatgatggatactcttgtg
tctcttatctaccgaaatggagatgagcggaccaaggcacgtgcaatgctatgtgatatt
tatcaccatgccttaatggacaactttgggactgctagagacttgttgctaatgagtcat
ctccaagacaacattcagcacatggatatctcaacacagattctcttcaacaggaccatg
gcgcagcttggcctttgtgccttccgtgttggtatgatcactgaatcccatagctgcctc
tccgaactctactctggtcagagagtgagggagttacttgcccaaggcgtttctcaaagt
cgataccatgagaagacacccgaacaggaaaggatggagaggagaaggcaaatgccatac
cacatgcacataaacctcgagctcctggaggctgttcacctcatcggtgccatgctactt
gaagtcccaaacatggcggcaaactcgtttgaagccagacgcagagtgatcagcaagaat
ttccgtcgcctgcttgagatcagcgagaggcaagcgttcaatgcaccacccgaaaatgta
cgtgatcacgtcatggcagccaccagagccctgaccaaaggagatttccagaccgcgttc
gatgttttgaactctcttgatgtctggagaatgctcaagaaccgggacagtatcctcgac
atggtgaaagctaggatcaaggaagaggctctaaggacttacctgttcacatactcgagc
tcctatgagtccctgagccttgaacagctggctaagatgtttgacgtcaccgaagcacat
gttcacagcattgtgagtaagatgatgatcaatgaagagcttcacgcaagctgggaccag
ccaacacgatgcatcgtcttccatgaagtgcaacacagcagattacagtcattggctttc
cagctaaccgagaaactatcggttttggcagagagtaatgaaagggcaatggaagcaagg
accggtggaggtggtcttgatctgagttcgaggagaagggacaacaatcaggactatgca
gcagcatcaggtggtgggagatggcaggacaacaacatgagttatggacaaggaagacaa
ggtaacaacagatctggatatggaggaagaccaggacagcctagagactggtcgggccag
aaccgaggaggaggatatgcagcaagagctgggtcgggaaacagaggtggtggtatgcaa
atggatggctcaacccgtatggtgagtcttaaccgtggtgttcgagcttaa
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