Raphanus sativus (radish): 108861584
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Entry
108861584 CDS
T06014
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108861584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108861584
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108861584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_2
TIP49
AAA_5
AAA_16
RNA_helicase
AAA_22
AAA_14
AAA_28
AAA_17
AAA_33
nSTAND3
AAA_18
NPHP3_N
Rad17
Mg_chelatase
Cytidylate_kin2
Viral_helicase1
IstB_IS21
NB-ARC
Vps4_C
AAA_3
Bac_DnaA
ABC_tran
AAA_lid_PRS2_C
Parvo_NS1
Sigma54_activ_2
CobT
Motif
Other DBs
NCBI-GeneID:
108861584
NCBI-ProteinID:
XP_018490988
UniProt:
A0A6J0P4V0
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All DBs
Position
5:39871073..39874504
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AA seq
812 aa
AA seq
DB search
MVRRGRGGGGGGGGMGGGINRRYLSQVMDSCGKELATAEEIVDDLRSRYGNFARLTRQVL
LLNVRHVLTSRSNNKRSKDEDEDDNNGDDSDDGGKTKKKPRRVDEKEDKLLRAEQSHLKR
RNKERSVSSSSSEDSGDISTSEDAIYSQKLSPRFDLINDSLRDNYAKMNSPSPSPAPKKP
INVELETVTNDKARNKMMTTMGGRLKKEPPRLSRPLTPNASEVLKGGGGPTFKDFGGIKQ
VLDDLENYILFPLLNPPPFNTVGVKPPPGILFHGPPGCGKTQLANAVANEVGVPFYQISA
TEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTC
MDGPRNKNEAHSSSGYVLVIGATNRPEALDPALRRSGRFEREIALTVPDEDARAEILSVV
VQRLRLEGSFDMKRIARLTPGFVGADLEGVANMAGSLAIKRIKDSRKLQLSGDNEDDKSW
LRQPWSEEDLDKLFVRMSDFEEAVKLVKGSLTREGFSTVPNVTWGDVGGLDHLRSELNNY
IVKPIKNPEIYKAFGATLETGFLLYGPPGCGKTLVAKAVANEAGANFIHIKGPELLNKYV
GESELGIRTLFQRARTSSPCVLFFDEVDALTKSRGREGGSVVESVLNQFLTELDGGERRN
VYVIGATNRPDVMDSAFLRPGRFGNLVYVPLPNADERVSILKSIARKRPIDPSVDLDAIA
NKCEGFSGADLANLMDKAIHVAVKEKFESSEDEEIDLSDCTIKMTHFEQALSLVTPSVSK
QQIKHYEELPKKLQRSSNKMEQINVGSSFALE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggagaggtcgcggcggaggaggaggaggaggaggtatggggggaggaataaat
cggagatatctgagtcaagtaatggattcgtgcgggaaagaattagcaacggcggaggaa
atagtggatgaccttcgttccaggtacggtaatttcgccaggttgacccgtcaagtgctt
ctcctcaacgtcagacatgtccttacttcccgatccaacaacaagcgttccaaagacgaa
gacgaagatgacaacaatggcgatgattctgatgatggtggtaagaccaagaagaaacca
agacgtgttgatgagaaagaggacaagttgctgcgagctgagcaatcccatctcaagagg
agaaacaaggagcgttcagtgtcttcttcttcttcggaagacagtggcgatatctccact
tccgaggacgccatatacagccagaagttgagcccaaggttcgatttgatcaatgacagc
ctacgagataactacgctaagatgaatagccccagccccagccccgcccccaagaaaccc
attaatgtcgaacttgagactgttaccaacgacaaagcaagaaacaagatgatgactaca
atgggtggccgcctcaaaaaggaacctcctagactctctcgtcccttaactcctaatgcc
tccgaggtgcttaaaggaggaggaggacctacttttaaagactttggtgggattaaacaa
gtgttggatgatttggagaattatatcctcttccctcttctcaatcctcctccctttaac
actgtgggagtcaagcctcctcccggtattctcttccatggtccccctggctgtggtaag
actcagctcgccaatgccgttgccaatgaagttggtgttcccttttatcagatttctgcc
actgaagtcgtttctggtgtctctggtgcttctgaagagaatattagagagctcttctct
aaagcctataggactgcgccttccattgtctttatcgatgagattgatgccattggatcc
aagagagagaaccagcaaagggagatggagaagcggatagttactcaattattgacttgt
atggatggccctcgtaataaaaatgaagctcattctagttctggatatgttctcgtcatt
ggagctactaataggcctgaggctcttgatcctgctctcaggagaagtggccgatttgag
cgtgagattgctctaaccgttcctgatgaagatgccagggctgagatactctctgttgtt
gtccaaagacttagacttgaaggttcctttgacatgaaaagaatcgctcgcttgactcct
ggttttgttggtgctgatttggaaggtgtagctaacatggctggcagtcttgccattaag
aggatcaaggattctagaaaattgcaactgtctggtgacaacgaggatgataaatcttgg
ctgaggcagccctggtcagaagaagatttggataagctctttgtcagaatgtctgatttc
gaggaagcagtaaagttagtaaagggatctttaacacgagaaggtttctctactgtgcct
aatgtaacatggggtgatgttggtggacttgaccatctacggagtgaactcaacaattac
atagtcaagcctatcaaaaatccagagatctataaggcttttggggcgaccttagagaca
ggtttcttgctctatggaccaccgggttgtggcaagacgttggttgcaaaggcagttgca
aacgaggcaggagctaatttcatacatatcaagggtccagaacttctaaataaatacgtt
ggagaaagcgagcttggtattaggaccttgtttcagcgcgccaggacaagctcgccatgt
gtactcttctttgatgaggtggatgctttgacaaaaagtcgtgggagagaaggtggttcg
gttgttgaaagtgttttgaaccagtttcttactgaactggacggtggagagagacgcaat
gtatatgtaatcggagctacgaacaggcccgatgtgatggattctgcattcttgagaccg
ggtaggtttgggaatctagtgtatgtacccctcccgaacgcggatgagcgtgtctcgatc
ctgaaatctatcgcaaggaagagacccatagatccgagtgttgatctggatgccattgca
aacaagtgcgaaggtttcagcggagctgatctcgccaacctgatggacaaagcgatacac
gtggcagtgaaggagaaattcgagtcaagtgaagatgaagaaatagatttaagtgattgc
accatcaagatgactcatttcgagcaggccttgtccttagtcacaccatctgtgagcaaa
cagcaaataaaacactacgaggaactaccaaagaagctacaaagaagcagcaacaagatg
gagcaaatcaacgtaggatcatcttttgcactcgagtaa
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