Raphanus sativus (radish): 108861687
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Entry
108861687 CDS
T06014
Name
(RefSeq) protein transport protein SEC24 A
KO
K14007
protein transport protein SEC24
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108861687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108861687
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108861687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
108861687
NCBI-ProteinID:
XP_018491118
UniProt:
A0A6J0P555
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Position
5:complement(2585411..2591000)
Genome browser
AA seq
1007 aa
AA seq
DB search
MNTENRNFPARPPSSSPFASAPPPGVRPQSGGPETVGFRPPIRPFAPSGPPMAPPLTGGV
MRPGQAPLVSQVPGSRLPGPPPQPSSNSFPSPAYGGPPGGGSFQRFPTPPPPHSAPPPPQ
TLAGHLSPPMSFRPQQPMAPVTMGPPPQSMTSGLPGGGFASPPGPGFQQSMPPVNPSYPG
YPSNQVSQGPPKPFQSLPQGPPSTVSSYPPQTGGFGQHPGQQNLHPGYAPPTSNVQGLVE
DFNSLSLSNIPGSLEPGLDHTSFPRPLEGDVEPSSFSEAYPMNCHSRYLRLTTSAIPNSQ
SLASRWHLPLGAVVCPLAEAPEGEEVPLIDFGSSGIIRCRRCRTYVNPYVTFTDSGRKWR
CNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLI
DVSFSATKSGMLEVATQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVV
SDLDDIFVPLPDDLLVNLSESRNVVEAFLDSLPLMFRDNVNVESAFGPALKAAYMVMNQL
GGKLLIFQNSLPSLGVGRLKLRGDDPRIYGTDKEYTLRVAEDTFYKQMAADCTKFQIGIN
VYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSIHGDKLRHELARDLTRETAWESVMRI
RCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLTLEETLLTTPTVYFQVALLYTA
SCGERRIRVHTAAAPVVTDLGEMYRQADTGSIVSVYSRLAIEKTLSSKLDDARNVIQQKI
VKALREYRNLHAVQHRLGSRLIYPESLKLLPLYGLAICKSTPLQGGPADASLDERCAAGF
TMMALPVKKLLKLLYPSLFRVDEWLLKPSADIDDLKDVLRRLPLAAESLDSRGLYIYDDG
FRLVLWFGRMLSPDIAKNLLGADFAAELSRVTLEEQENGMSKKLMRLIKKVRENDPSYHP
MCFLVRQGEQPREGFLLLRHLIEDQMGGSTSYVDWILQLHRQIQQNA
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagagaatcggaattttccagctaggcctccgtcctcgtctccattcgcatct
gctccgccgccaggggttcgacctcaatccggaggaccagagacggttggttttagacca
cctataaggcctttcgcaccttctggtcctcctatggctccaccactaacggggggtgtg
atgaggcctggccaagctcctttggtttctcaggttccagggagtagacttccaggtcct
cctccacagccatcttcgaattcgtttccttcaccagcttatggtggtcctcctggtggc
ggttcttttcagcggtttccaactcctcctcctcctcatagtgctccaccaccacctcaa
actcttgcaggtcacttatcgcctccgatgtcttttcgcccgcagcaaccaatggcgcct
gtgacaatgggacctcctccgcagagtatgacttctggtttacctggaggaggatttgct
tctccccctggtcctggttttcaacagtccatgcctccagttaatccgtcttatcctggt
tatcccagcaatcaggtctcacagggtcccccaaagccgttccagtctctacctcagggt
cctccgtctacagtctcatcgtatcctcctcagacaggaggttttggtcagcacccagga
cagcagaatctgcatccaggctatgcgcctcctaccagtaacgttcaaggtttggttgaa
gatttcaattcgctttccctttcaaatattcccgggtcgcttgagccaggacttgatcat
acctcattcccaaggccattggaaggtgacgtggagccaagttcgttttctgaagcgtac
cccatgaattgtcattctagatatctgcggctgacaactagtgcgattccaaattcccag
tctctggcgtcgaggtggcatttgcctctaggagctgtggtttgtccacttgctgaggct
cctgaaggggaggaagtaccacttattgattttggctcaagtggtatcatccgctgcaga
agatgccgtacctatgtgaatccttatgttacttttactgattctggaagaaagtggcgg
tgtaatatttgttctatgcttaatgatgtgcctggtgaatacttctcacacttagatgct
actggccgaagaatggacatggatcaaaggcctgagctgacaaagggaagtgttgaaatc
attgctccaacagaatacatggttcggcctccgatgccaccaatctacttcttcctcatc
gatgtttcattttctgctactaaaagtgggatgcttgaggttgctactcaaacgattaag
tcttgtttggataacctgcctggttatcccagaactcaaattggatttattacttatgac
agcactttacatttttacaacatgaagtcatctttgagtcagccgcaaatgatggtcgtc
tcggatctagatgatatatttgtcccattaccggatgatctccttgtcaatctatctgag
tctagaaatgtagtggaagcctttttggacagtctgcctctgatgtttcgagataatgtc
aatgtggaatcggcttttggtccagccctcaaagcggcgtacatggttatgaatcaactt
ggtggcaagttgctaattttccagaactcgttaccttctcttggtgttgggcgtttaaag
ttgcgcggagatgatcctcgcatctatggaactgacaaagaatatactttaagagtagct
gaagataccttctataaacaaatggctgcagattgtaccaagttccagataggaattaat
gtttacgcgttcagtgataagtacactgatattgcctccttagggactctggcaaaatac
actggaggacaggtgtactactatccaggcttccaatcgtctatccatggagacaagtta
agacacgagctggctagagacctgacaagagaaactgcgtgggaatccgttatgcgaata
agatgtggaaaaggaattcgattctcgtcctaccatgggaatttcatgctaaggtctact
gacctgcttgctcttcctgctgtcgactgtgacaaagcatatgcaatgcagctaacactg
gaagagacattgcttacaactccgacggtgtatttccaagtcgctttactatacactgct
tcttgcggagagaggcgtataagggtacacacagctgctgcaccagtggttacagatctt
ggagagatgtatagacaagcagacaccggttccattgtctctgtatattctagattagca
attgagaaaaccttatcctcaaaattggatgatgcacggaatgtcatacagcaaaagatt
gttaaagctctcagagaatatcgtaatcttcacgcggtgcagcatcggttggggtctaga
ttaatatacccggagtctctgaagttattgccactgtacggattggcaatttgtaagtcc
actcctcttcaaggtggacctgctgacgcttcacttgacgagcgctgtgcggcaggcttc
accatgatggctctgcctgtcaaaaagctattaaagctgttatatcccagtttattccgt
gttgatgagtggctcttaaagccatcagcagacattgatgaccttaaagacgtactaagg
agattgcctctggctgcagagagtttggattctagaggcctttacatatatgatgatggt
tttcgattggttttgtggtttggccgtatgctttcacctgacattgctaaaaatcttctt
ggggctgactttgcagcagagctctcaagggttacattggaagagcaagagaatgggatg
tcgaagaagctaatgaggctgataaagaaagtgagggagaatgatccgtcatatcatccc
atgtgtttcctagtgaggcaaggagaacaaccccgagaaggcttccttctcctccgacat
ctcattgaagaccagatgggcggttcgactagttatgttgactggattctgcaacttcac
cgccagatccaacaaaatgcataa
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