Raphanus sativus (radish): 108861721
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Entry
108861721 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108861721
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108861721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108861721
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
108861721
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Other 90S particles
108861721
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
DUF1779
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
108861721
NCBI-ProteinID:
XP_018491158
UniProt:
A0A6J0P586
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All DBs
Position
5:25969391..25971754
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AA seq
292 aa
AA seq
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MVRPYGIKVNKRKERRERYDKEEDEEDEQPKFEQKRKEVKKAKREEATSNAEEEDDEENE
IAEEAADELDVGIPIVVSGNKKDQTGVIFVLEKASLEVAKVGKTYQLLNSDDHANFLRKN
GRDPAHYRPDITHQALLMILDSPVNKAGRLKAVYVRTEQGVLFEVKPHVRIPRTFKRFAG
IMLQLLQKLSISASGKREKLMRVIKNPVTSHLPPNCRKIGFSYSSEKLVNMQKHLSTVCN
ETDTVFVLGAMSHGKIECDYIDDFVAISGYPLSAAYCISRICEALSTNWNII
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccgtacgggattaaggtgaacaagaggaaggagagaagagagaggtacgat
aaggaagaagatgaagaagatgagcagcctaagtttgagcagaaacgaaaagaagtgaag
aaagctaagagagaagaagccacctcaaatgcagaggaggaagatgatgaagagaacgag
atagctgaggaagcagcagatgagcttgatgtgggaatacctattgtcgtgtctggtaat
aagaaggaccagactggtgttatttttgtgcttgagaaggcttctctcgaagttgccaaa
gttggaaagacttaccagctactgaactctgatgatcatgctaatttcttgaggaagaat
ggcagagatcctgctcattacaggccagacatcactcatcaggctcttttgatgattttg
gatagtccggtcaacaaggctgggaggttgaaagcggtgtatgttagaacagagcaaggt
gttctttttgaagttaagccacatgttcgtataccaagaactttcaagcgtttcgctgga
atcatgttgcaattgctacagaagcttagcattagtgcatctgggaagcgtgagaaactt
atgagggtgatcaagaaccctgttacaagccaccttccgcctaactgtagaaaaataggg
ttctcgtatagctctgagaagctggtcaacatgcagaagcacctatctactgtctgtaat
gagaccgacactgtttttgtgctcggtgcgatgtcacacgggaaaatagagtgcgattat
atcgatgattttgtggccatttcagggtatcctcttagcgcagcctactgtatctcaaga
atctgcgaggctttatcgacaaattggaatattatataa
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