Raphanus sativus (radish): 108861896
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Entry
108861896 CDS
T06014
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108861896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108861896
03036 Chromosome and associated proteins [BR:
rsz03036
]
108861896
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108861896
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108861896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
108861896
NCBI-ProteinID:
XP_018491375
UniProt:
A0A6J0P3Y2
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All DBs
Position
5:complement(31117034..31122062)
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AA seq
1296 aa
AA seq
DB search
MFSPQTKRPKQSSLSHRTPLHRAAPPDSPVTPATHNRESSNRSSFISDRPATGTPAPWAP
RLSVLARVSSPVNDANQVKPVFVREFPQLARDEQSRFSRNNNNTHPVDVCVSGGMDKETC
LSWFITGTKLFVWSHLTASPSRKCVLLELPFANQESLQDGKSWLISLVSWDAASTGAPAR
SPRSPIGLVLVNRKTRGVVFWSDIFSSQEASPVTTSLGSFDETGMYSSPKVRKSSRQSNG
IRGNRSGYSDLNALITTPVDSTERVCIAVACSSSGELWKFTCSPTGIESNQIHLDVSSSS
MSEGYPRSLVWKGSARESCCQFLMLTDCDIHCFTIEPDLTLSEVWRHEIVGNDGDSGIKK
DIASQKEIWPLDLQVDDQGKVITVLVATICMDRASSSSYTQYSLLTLQQKSETRLADGKE
ERVLEKQAPTQVIIPKARVEDKDFLLSMKLRVGGRPQGSAMILSGDGTATVCYCHGNSTR
LYKFDLPYDAGKVLDASVLSSTDEHECGAWTVLTEKAGVWAIPEKAIVLGGVKPPARSLS
RKDSSNERSRDETMSTPYGIDRTARLDGSDLQNSEDKVNAKMGVFRQTARDEESEALLGQ
LFEGFLLSGRVDGALGKLSQSGAFDRDGETNVFARKSKSIVDTLAKHWTTTRGAEIVAMT
VISTQLVEKQQKHEKFLNFLALSKCHEELCSKQRNSLQIVLENGEKLAAMIQLRELQNLI
NQSRLGKFGSPHAASQDQVSCALWDLIQIVGERARRNTVLLMDRDNAEVFYSKVSEIEEV
FYCLNRQLEYIIRDEQPLGIQVQRACELSNACVTILRAALDYKNEHQMWYPPLEGLIPWH
SQPVVCNGLWCIASFMRHLLTEGSRIDISSKSEIYMHLEVLTEVLLEACAGSATARLERE
EEDKALLDEYWTRRDTIFDCLYEQAKEFMEADFQNVNERTEMTDEDIFKNRCSDLLSIAK
RHAGYKVMWRICYDLNDTGLLRNLMHEGVGPQGGFSYFVFQQLYDMKQFSKLLRLGEEFQ
DELLIFLKRHSDLLWLHQVFLHQFSSASETLHSLALAQDEESMTATNERTVSESEDVQPT
FADRKRFLNLSKIAYVADKDTDSKSIVKRIEADLKLLKLQEELTKALPSDEQTRNRLFRP
EELIEICLSIQGRWTAIKAFEVFAWTSCSFRENHRSVLEECWRNAADQDDWDRLHQASAN
EGWSDKETLQNLKNTALFQASKRCYGPNRVNAFDVDFAQVLPLRRENPEDKTSSVEDLLM
SHKDFAEAGKLMLTAIMLGCVEEEGIEAEDFSSPME
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccacagacgaagcgacctaagcaaagctctctttctcacagaactccactc
catcgagccgctccgcccgattctccagtaactccggcaactcacaatcgcgaatcatct
aaccgctccagtttcatatcagatcgtcccgccactggaactcctgcgccttgggctcct
cgtctctctgttctcgctagagtttcttctcctgtcaatgatgcaaaccaagtaaagcct
gtgttcgttagagagtttccccaattggctagagatgaacaatcacgcttctccaggaat
aataataatactcatcctgttgatgtttgtgtttcaggtggaatggataaagaaacttgc
ctttcttggtttatcactggaactaaactttttgtttggagtcacttgacagcctcacca
tcaagaaaatgtgttcttcttgaactccctttcgccaatcaagagtctttacaagatggt
aaaagctggttgattagtctcgtctcttgggatgctgcttctactggtgcacctgctcga
tctcctcgtagtcctattggtcttgtgttggtcaacagaaaaactcgaggtgttgtgttc
tggtccgacatcttttctagtcaggaagcttcgcctgttactactagtcttggatctttt
gacgagactggtatgtatagttcacctaaggtcagaaaaagctcgcgacaaagcaatggg
ataagaggcaatagatcaggatacagtgatcttaacgctttgattactaccccggttgat
tcaacagagcgtgtttgtattgctgtcgcctgcagttccagtggtgagctatggaagttt
acttgtagccctacaggcattgaaagtaatcaaatacacttggatgtcagctcttcctcc
atgagtgagggttacccgaggtctctggtctggaaaggatcggctagagagtcttgctgt
caatttttaatgttgacagattgtgacatacattgttttacaatcgagcctgatctaact
ctttcggaagtctggcgtcatgagattgttggcaatgatggcgattctggtatcaagaaa
gatatagcaagtcaaaaggaaatctggcctctggatttgcaggtggatgatcagggtaaa
gtgattaccgttcttgttgctactatctgcatggaccgggccagcagttcaagctataca
cagtattcgcttttaaccttgcaacaaaagtctgagacgaggttggcagatggaaaagag
gaaagggttcttgagaaacaggctccaacccaagtcattatcccaaaagcaagagtggag
gataaagacttcttgctctctatgaaactcagagttggtggtagacctcaagggtcagct
atgattctttcaggtgatggaacagctacagtctgctactgtcatggtaactccacccgg
ctctataagtttgatttaccttatgatgccggtaaggtcttggatgcatccgttctctcc
tcaactgacgaacatgaatgtggtgcatggactgtgctaactgagaaagctggagtgtgg
gctataccggagaaagctatcgtacttggtggagttaaacctccagcgagaagtttgtca
cgcaaagacagctcaaatgagagatcacgagatgagacaatgagcacaccatatggtatt
gacagaaccgctagattggatggttctgatttacaaaatagtgaagacaaagttaatgct
aaaatgggagtttttcgtcaaacagcccgtgatgaagagtcagaagctttgcttggtcag
ctctttgaaggttttctgttatctgggagagttgatggtgccttggggaagcttagtcaa
tctggtgcatttgatagagatggagagaccaatgtttttgctcgcaaaagcaaatctata
gttgacacattagctaagcattggacaacaactagaggggcggagatcgtagctatgact
gttatatctacacagttggtggagaaacaacagaagcatgagaaatttctaaactttctt
gccctatccaaatgccatgaggagctgtgttctaaacagaggaattctttgcaaatagtt
ttggaaaatggtgaaaaacttgcggcaatgattcaactccgggaactgcaaaacttgatt
aaccagagccgcttaggcaaatttgggtcgccgcatgctgcctcacaggaccaggtttca
tgtgccctttgggatcttattcagattgtgggggagagagcccggagaaatacagttctg
ttgatggacagagataatgctgaagttttctacagcaaggtatctgaaattgaggaagta
ttttattgcctgaacaggcagctagaatacataatcagagatgaacaaccactgggaatt
caagtgcagagagcatgcgaactctcaaacgcatgtgttacaattcttcgggctgccttg
gattacaaaaatgagcatcagatgtggtatccaccacttgaaggtttaataccttggcac
tctcagcctgttgtgtgtaatggactgtggtgcattgcgtccttcatgcgtcatctgtta
actgagggatctaggattgatatctcttctaaatccgagatatacatgcatctcgaggtg
cttactgaagttttactggaggcttgtgctggttctgccactgctagattagagcgagaa
gaagaagacaaagctttgcttgatgagtactggacacggcgagataccattttcgactgt
ctttatgaacaggccaaagagttcatggaagcagatttccagaacgtcaatgaaagaact
gaaatgacagatgaagacatcttcaaaaaccgttgttcagatttactttctattgcaaag
cgacatgcaggatataaagttatgtggaggatatgctatgatctcaatgatactggtctg
ctcagaaacttaatgcacgaaggtgtaggaccacaaggaggcttcagttacttcgtgttt
cagcaactttacgatatgaaacagttctctaagcttctacggcttggagaagaattccag
gacgagttattgatatttctaaaacgccactctgatctgctgtggcttcatcaggtgttt
cttcatcaattctcatccgcctctgaaactcttcattcgctggctctagcacaagacgaa
gagtctatgacagctactaatgaaagaacggtgtcagaatctgaagatgtacaaccaaca
tttgcagaccgcaagcggttcctgaacctttcaaagatagcctatgtggcagacaaggat
actgattcaaaatcgattgtgaagcgcattgaagctgacctcaaattactaaagctgcag
gaagaactaacaaaagctcttccaagcgatgaacaaaccagaaaccgactgttccgacca
gaggagctcattgaaatttgtttaagcatccagggccgatggacagctataaaggctttc
gaggtgtttgcatggacgagctgttcattccgtgagaatcacaggagtgtcttggaagaa
tgctggagaaacgctgcggatcaggacgactgggacaggctccatcaagcctctgctaac
gaaggttggagcgacaaagaaacattacagaatctaaagaacacagcgcttttccaggct
tcgaagaggtgttatggaccaaaccgagtgaacgccttcgatgtggactttgcacaagtc
cttcccctgagacgagagaaccctgaggataaaacttcttctgtagaggacttgttgatg
agccataaagatttcgctgaggcgggtaaactgatgctaactgcaatcatgctgggttgt
gttgaagaagagggtatcgaagcagaagatttttcatccccaatggagtaa
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