Raphanus sativus (radish): 108862139
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Entry
108862139 CDS
T06014
Name
(RefSeq) ABC transporter F family member 4
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsz03012
]
108862139
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108862139
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Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
AAA
AAA_28
nSTAND_NTPase5
MMR_HSR1
AAA_22
AAA_23
AAA_16
AAA_15
AAA_25
MeaB
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
108862139
NCBI-ProteinID:
XP_018491683
UniProt:
A0A6J0NZB3
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All DBs
Position
5:24602505..24605420
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AA seq
718 aa
AA seq
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MGKKKSDESAPPVKGKSSGKDSSKETKKEKLSVSAMLAGMDQKPDRAPKKGPSSSRAKAA
PKSASPYDDMDLPSSDEEDDGDSDEEQRQAEARRKLKSEQRHLDISVTDKEQKKREMKER
AALEAIELAKKEALRDDHDAFTVVIGSKTSVLEGEDTADANVKDITIESFSVSARGKELL
KNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKSALLA
VVSANEELVKLREEAAALQNSSCDNEDDDDSGEKLAELYERLQILGSDAAEAQASKILAG
LGFTKEMQVRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW
KKTLVVVSHDRDFLNTVCTDIIHLHDQNLHFYRGNFDSFESGYEQRRKEMNKKFEIYDKQ
VKAAKRSGNRAQQEKVKDKAKFTAAKEASKSKGKGKAVDEDGPAPEAPRKWRDYSVEFHF
PEPTELTPPLLQLIEVSFCYPNRPDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAG
DLVPSEGEVRRSQKLRIGRYSQHFVDLLTMGETPVQYLLRLHPDQEGFSKQEAVRAKLGK
FGLPSHNHLTPIMKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALEEF
SGGVVLVSHDSRLISRVCEDEEKSQIWVVEDGTVSFFDGTFEEYKEDLQREIRAEVDE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagaagtcagacgagagtgctcctcccgtgaaggggaagtcaagtgggaaa
gactcttctaaagagaccaaaaaggagaagctttcagtctctgctatgcttgcaggtatg
gatcagaaacctgatagagcacctaagaagggtccttcatcatccagagctaaggctgct
cccaagagtgcttccccttacgatgacatggatcttccttcatccgacgaggaagacgat
ggagattccgatgaggagcagagacaggctgaagcgaggaggaagctgaagagcgagcag
aggcatctcgatatctctgtgactgataaggagcagaagaagcgagagatgaaagagaga
gcggctctcgaggctatagagcttgcgaagaaggaggctttgagggacgaccacgatgcc
ttcactgttgttattggaagcaagacgtctgtgcttgaaggggaagacacggctgatgct
aatgttaaggatatcacgatagagtctttctccgtctctgctaggggtaaggagcttttg
aagaatgcttctgttaagatatcgcatgggaagaggtatggattggtcgggcctaatggg
atggggaagtctactttgttgaagcttttagcgtggaggaagattccggttccgaagaat
atcgatgttcttcttgtggagcaagaggtggttggtgatgacaagagcgctctgctggca
gttgtgtccgccaacgaagagttggttaagctacgggaagaagctgcagctctgcagaac
tcgtcttgtgacaacgaagatgatgatgattctggtgagaagcttgctgagttgtatgag
aggctacagatcttggggtcagatgctgctgaagcacaggcgtccaagattctcgcgggg
ttgggttttacgaaagagatgcaagtgcgtccgactaagtcgttcagtggtggatggagg
atgagaatatcgttagctagagctctctttgtgcagccgactcttttgttgttagatgaa
cccaccaaccatcttgacctgagagctgttctctggttggaggagtatctctgtcgctgg
aagaagacgttggttgttgtctcccacgaccgtgacttcctcaacactgtctgcacggat
ataattcatttgcacgaccagaatctccacttctaccgtggcaacttcgatagtttcgag
agtggatacgagcagcgacgcaaggagatgaacaagaagtttgagatttacgataaacag
gttaaagcggctaagagatctggaaaccgtgctcagcaggagaaggtaaaagacaaggcc
aagttcaccgcggcgaaagaagcgtccaagagtaagggaaaaggtaaggcggtggatgag
gatggcccagcacctgaagctccgagaaagtggagagactatagcgttgagtttcatttc
ccggaaccaaccgagctcactcctcctctcctgcagttgatcgaggttagcttctgctac
ccgaatagaccagacttcaggctctcggatgttgatgtgggtatcgatatgggtacaagg
gtcgctatagttgggcctaacggagctggaaagtccactcttttgaaccttcttgctgga
gatttggttccgagtgaaggtgaagtgagaagaagccagaagctgaggattgggagatac
tctcagcactttgttgacctgttaacaatgggggaaacaccagttcagtatctgctccgc
cttcatcctgaccaagagggatttagcaaacaggaagctgtgcgtgctaagctaggcaag
tttgggctaccgagtcacaaccacttgactccgatcatgaaactgtccggtggacaaaaa
gctagagttgtgttcacttcgatctcaatgtctaagccacacattttgcttcttgacgag
cctacgaatcacttagacatgcagagcatagatgcgttggctgatgcgctagaggagttc
agtggaggagttgtgctggtgagtcacgactctagacttatatcacgcgtctgtgaggat
gaggagaagagtcagatttgggttgtggaagacggaactgtgtctttcttcgatggcacg
tttgaagagtacaaggaagatctccaaagagagatcagagcagaggtcgatgagtga
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