Raphanus sativus (radish): 108862201
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Entry
108862201 CDS
T06014
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108862201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108862201
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108862201
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108862201
Atg1 complex
108862201
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108862201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
108862201
NCBI-ProteinID:
XP_018491759
UniProt:
A0A6J0P597
LinkDB
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Position
5:complement(7806818..7809379)
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AA seq
596 aa
AA seq
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MNRSSSSNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGEQMIFSSPSSSSSSSS
SVRPRDKWFNLALRECPAALESFDIGRRSTLEPLVVDVVLVVARPFDHQMDDSPGGARNE
QIIERWVVQYDNRKVRDTSSSRRSSSSNKLQVMYKKATLLLRSLFAMVRLLPAYKIFREL
NSSGQIFKFKLVPKVPTVIEPFTRREEAEMHKFAFTPVDTICGRLCMSVLYRSLSDVSCC
QQHSAPLSPTFITDYVGSPLADPLKRFPSLPLSYVGSPSPPLLPFQRRHSWSFDRCCKAS
SPPPPSVSCSPSPPTRSDSQAALVTNNPCSLRRRLPPHPCDVPSGRRKESYAEDFSPGCS
PSVPRSITRTESAPVRIPAPTLVAPSSHLKLSRHASLKPVRNSGPVESGAALEKLHIYGR
EDFRRKLSSNSSPRISFSRSSSRSYQDDFDDTDFPCPFDVEYDEITDPSDSRPSSFEQRG
GDAHEQPPHELSSGSYPKKSQDAAVGALVNMLKKAPPLRQDVSESVIPELCWNNNENKPG
GGQEIATASMTASGIALAAKTTADALEELRSYKEMKNVLLSQSKMDSSSPFAVSES
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaagcagcagcagcaactcggaaggtgctaaagcagagcagatcatattcgag
ttctttgctaaaagcctccacatcattctcgaatcaaggactcctttcatgtcttcaaga
aacttcagcggcgagcagatgatcttctcatcaccttcctcgtcttcctcctcttcctca
agcgtcaggcctcgtgacaaatggttcaacttagctctcagagaatgtcccgcagcgttg
gagagtttcgacatcggtcgcagaagcaccttggagcctctggttgttgacgtggttctt
gtggtggcgaggccgtttgatcatcagatggatgattctcctggtggggccaggaacgag
cagatcattgagagatgggttgtgcagtatgataacagaaaggttagggacactagtagt
agcaggaggtcaagtagtagtaataagttgcaagtgatgtataagaaagcaactctgctt
ctgagatcactctttgccatggttaggcttctacctgcttacaagattttcagagaactc
aactcctctgggcagatcttcaagttcaagctcgtccctaaggttcccaccgtaatcgaa
cctttcactcgcagagaagaggcggagatgcacaagtttgctttcacgccggttgatacg
atctgcggtagactctgcatgtctgtgctgtaccgatctctctcggatgtcagctgctgc
caacaacactcggctcctctgtctccaacgtttatcaccgattacgttggaagtcctttg
gctgatcctttgaaaaggttcccttctcttcctctttcttacgtcggctcaccgtcaccg
cctttgctgccgtttcagaggcgtcatagttggagtttcgatcgctgttgcaaggcctct
tctccaccaccaccttcggtttcttgctcaccgtctcctcctacacggtctgattcacag
gcggcgttggttactaataatccttgttcccttcggcgtcgccttcctcctcatccttgt
gatgtaccgtctggtcgtaggaaggaaagctatgctgaagatttttctcctggttgttct
ccttcagtcccaagaagcatcacgcgtactgaaagtgctccagtcaggattccagctcct
actttggtggcaccttcttctcatttgaaactttcgaggcacgcttctttgaagccagtt
agaaactctggtcctgttgaatctggagcagctttggagaagctgcatatctatgggaga
gaagactttaggaggaagctatcttcaaacagctcacctaggatatcattttctagaagt
tcaagtagatcataccaagatgattttgatgatactgatttcccttgtccgtttgatgtt
gagtacgatgagattacagatcctagcgatagcagaccaagctcttttgaacagagagga
ggagatgcacatgaacaaccaccacacgagttgtcaagcggctcatacccaaagaagtca
caagacgctgcagtcggcgctctagtgaatatgctgaagaaagctccacctctcagacaa
gatgtctctgaatccgtcatacctgaactctgttggaacaacaatgagaacaaaccagga
gggggtcaggagatagcaacggcgtcaatgacagcgtcaggaatagctctagcggcaaag
acaacagctgatgcgttggaagagcttaggtcttacaaggaaatgaagaatgtgctgctt
agccaatccaaaatggattcgtcttcaccctttgctgtttcagaatcttga
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