Raphanus sativus (radish): 108862226
Help
Entry
108862226 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108862226
00071 Fatty acid degradation
108862226
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108862226
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
108862226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108862226
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108862226
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108862226
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108862226
Exosomal proteins of breast cancer cells
108862226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4244
Motif
Other DBs
NCBI-GeneID:
108862226
NCBI-ProteinID:
XP_018491790
UniProt:
A0A6J0P5C7
A0A9W3DUF7
LinkDB
All DBs
Position
5:complement(34312563..34316197)
Genome browser
AA seq
714 aa
AA seq
DB search
MEDPPMATSEYGLSTIIAGGVAALLVPILLSVVLNGTKKGKKRGVPVKVGGEEGYAMRHA
RGPDLVDVPWPGATTMAALFEQACKKYSSNRLLGTREFIDKEIVTSSDGRKFEKLHLGEY
RWQSYGEVFERVCNFASGLVGGVGHNVDTRVAIFSDTRAEWFIAFQGCFRQNLTVVTIYA
SLGEDALIYSLNETQVSTLICDSKQLKKLSAIQSSLKTVKNIIYIEEDGVEVASSDVNGL
GDITVSSISEVEKLGKEKPVEPSLPSKNGVAVIMFTSGSTGLPKGVMITHGNLIGTAAGV
MKVIPKLNKNDVYIAYLPLAHVFELEAEIVVFTWGSAIGYGSAMTLTDTSNKIKKGTKGD
VSVLNPTLMTAVPAILDRVREGVLKKVEEKGGMAKTLFNFAYNRRLAAVNGSWFGAWGLE
KMFWDTLVFKKIRAVLGGRIRFMLVGGAPLSPDSQRFINICMGSPIGQGYGLTETCAGAT
FSEWDDPTVGRVGPPLPCGYIKLVSWEEGGYRVSDKPMPRGEIVVGGNSVTAGYFNNQEK
TDEVYKVDEKGTRWFYTGDIGRFHPDGCLEVIDRKKDIVKLQHGEYVSLGKVEAALGSSN
YVDNIMVHADPMNSYCVALVVPSHGAIEKWAEEAGVKSSDVSELCENGEAVKEVQQSLTK
AAKAAKLEKFEIPAKIKLLPEPWTPESGLVTAALKIKREQIKAKFKDELHKLYA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcctccaatggcgaccagcgagtacggactctccacgatcatagcaggcgga
gtcgcggctctactagtaccaatcctgctctccgtcgtgctaaacggaaccaaaaagggg
aagaagagaggcgttccggtgaaagtaggcggcgaggaaggctacgcgatgcgtcacgcc
agaggtcccgatctcgtcgacgtcccctggccaggagccacgacgatggccgccttgttt
gagcaggcttgcaagaagtactcgagcaaccggttgctcgggactagggagtttatagac
aaggagatcgtcacgtcgagtgacggcaggaagttcgagaagcttcatctcggggagtat
cggtggcagagctatggagaggtctttgagcgtgtttgtaacttcgcctcggggcttgtt
ggtggtgttggacataacgttgatactcgtgtcgctatcttttctgatactcgtgctgag
tggtttatcgcttttcagggatgtttcaggcagaatttaactgttgttactatctatgct
tctttaggagaggatgctttgatttactcactcaatgagactcaagtgtcgaccctgata
tgcgattcaaagcaactcaagaagttgtctgcgatacaatcaagcttgaagactgtaaag
aacattatttacattgaggaagatggagttgaggttgcttctagtgacgtgaatggtctt
ggtgacatcactgtttcgtccatctctgaagttgagaaactggggaaggagaaacctgtt
gagccgagccttccttccaagaatggagttgctgttataatgtttaccagtggtagtacc
ggtctaccaaagggagttatgattacccacgggaatctaatcggaactgctgcaggagtt
atgaaggtgattccaaagctgaataagaatgacgtgtatattgcatatttacctttggcg
catgtgtttgagctggaagctgagattgtggtctttacatggggtagtgccatcggttat
ggctcagcaatgactttaactgacacttcaaataaaattaagaaaggaaccaaaggagat
gtttcagttctaaacccaactctcatgactgcagttccagctattcttgatcgtgtccgt
gaaggagttcttaaaaaggttgaggaaaagggtggcatggcgaagactctctttaacttt
gcttacaatcgccggttagcagctgtgaacggaagttggtttggtgcctggggtctggag
aaaatgttttgggatactctagtcttcaaaaaaatacgcgctgtgcttggaggacgcatc
cgatttatgctcgttggaggggctcctctgtctcctgattcgcaacgcttcatcaatatc
tgcatggggtctccaatcggtcaaggatatggattgactgaaacgtgtgctggagctacg
ttttctgagtgggacgaccctactgttggacgcgtgggaccaccactcccatgtggctac
attaagcttgtttcttgggaagaaggtggctatagagtttcagacaaaccaatgcctcga
ggggagattgtggtaggtggtaacagtgtaacagcaggttacttcaacaatcaagaaaaa
acagatgaggtttacaaggttgatgagaagggcacgaggtggttttacacaggagacatt
gggagattccacccggatggatgtcttgaagttattgacaggaagaaagatatcgttaaa
cttcaacatggggaatatgtatcccttggaaaggtggaggcagctttgggttcaagcaat
tacgttgacaacattatggtacacgcagacccaatgaacagctactgtgtcgctcttgtt
gtaccatcacacggagcaatagagaaatgggcagaggaagcaggagttaaatccagcgac
gtctctgagctatgcgagaacggtgaagcagtcaaggaggttcaacaatctcttaccaag
gcagcaaaggcggcaaagctagaaaagtttgaaatcccagcaaagataaagttattgccg
gagccgtggacaccagagtcgggactagtgacagctgctctcaaaataaagagggagcaa
ataaaggcaaagttcaaagatgaactccacaagctgtatgcctaa
DBGET
integrated database retrieval system
