Raphanus sativus (radish): 108862246
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Entry
108862246 CDS
T06014
Name
(RefSeq) beta-hexosaminidase 2
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00511
Other glycan degradation
rsz00513
Various types of N-glycan biosynthesis
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz00531
Glycosaminoglycan degradation
rsz00600
Sphingolipid metabolism
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz00604
Glycosphingolipid biosynthesis - ganglio series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
108862246
09103 Lipid metabolism
00600 Sphingolipid metabolism
108862246
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
108862246
00531 Glycosaminoglycan degradation
108862246
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108862246
00604 Glycosphingolipid biosynthesis - ganglio series
108862246
00511 Other glycan degradation
108862246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108862246
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
108862246
Chaperones and folding catalysts [BR:
rsz03110
]
Intramolecular chaperones
Others
108862246
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
108862246
NCBI-ProteinID:
XP_018491816
UniProt:
A0A6J0P5E9
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Position
5:21603292..21605481
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AA seq
596 aa
AA seq
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MIVETTLWLKSGTIMLTFIKLPLLLVFFISLLSPLLSTAATPINIWPKPRFLSWPQRKAI
TLSPDFTITSPQHQYLSASVARYLNLIRSENYSPLTTGPIKLTKGYTLRKLVITVTDLSL
PLHHGVNESYTLSVPVGSFSARLSAHSVLGAMHGLETFSQMVWGRAPHLCVPVGIYIQDS
PLFGHRGLLLDTSRNYYGVEDITRTIQAMSSNKLNVFHWHITDSHSFPLVLPSEPSLAAK
GSYGPDMVYTPEDVSMIVQFGLEHGVRVLPEIDTPGHTGSWGEAYPDIVTCGNMFWWPSG
KSWDERLASEPGTGQLNPLNPKTYEVVKNVIRDVAKLFPEPFFHGGGDEVIPGCWKTDSS
ITSFLSSGGTLSQLLEKYINSTLPYIVSQNRTVVYWEDVLLDAKIKVEASVLPKEHTILQ
TWNNGPVNTKRIVAAGYRVIVSSSEYYYLDCGHGGFLGNDSQYDQQGGGGSGGGSWCAPF
KTWQSIYNYDITDGLVDEEERKLVLGGEVALWSEQADPTVLDSRLWPRASAFAESLWSGN
RDERGVKRCGEALDRLNRWRYRMVKRGIGAEPIQPLWCLKNPGMCNAAVHSASQDL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatagttgaaacaaccttgtggttaaagtcaggaacaatcatgcttacttttatcaag
cttcctctgctactagtcttcttcatttcgcttctttctccattgctctccactgccgcc
acacctatcaacatttggccaaagccaagattcctatcatggcctcaacgcaaagccatc
accctctctccagacttcaccatcacttctccacaacaccaatacctttcagcctccgtt
gcacgctacctcaacctcatccgctcagagaattactctcctctcaccaccggtccaatc
aaacttacgaaaggctacaccttaagaaaacttgtaatcactgtcacagatctttctcta
ccgcttcaccacggtgttaacgagtcttacaccctctcagtccccgtcggaagcttctca
gcccgcttgtcagctcattcggttttgggagctatgcatggcctcgagacattctctcag
atggtttggggaagagctcctcatttgtgtgtacctgttggaatttatattcaggattct
cctttgtttggtcacagagggttgttgctagatacatcaaggaactactatggagtagag
gatataacaaggacaatacaagccatgagttcaaacaaactcaatgtgttccattggcac
ataactgattcacattctttcccactggtgcttccttctgagccttcacttgctgcaaag
ggatcttatggaccggacatggtgtacactcctgaagatgtctcaatgattgttcagttt
ggtttggagcatggtgttagagttcttcctgaaatagacactcctggccatacaggttca
tggggagaagcttacccggacatagtcacatgtggaaacatgttctggtggccatctggt
aaaagctgggacgagcggttagctagtgaaccagggactggtcagcttaaccccttgaat
ccaaagacgtacgaagttgttaaaaacgttatacgagatgtggctaagctattccctgag
cctttctttcatggaggtggagatgaagtcatcccaggctgttggaaaaccgattcttca
atcacttccttcttgtcctctggtggaacactaagccagcttcttgaaaagtacataaac
tcgaccttaccttacatagtgtcacagaaccggacagttgtttactgggaagatgttctg
ttggatgcaaaaatcaaggtggaagcatcggttcttcctaaagagcacacaatcttgcag
acttggaacaacggtcctgtgaacacaaagagaatagtagctgctggttacagagtaatt
gtatcttcatcggaatactactacttagactgtggtcatggagggtttctagggaatgat
agtcaatatgatcagcaaggaggtggtggtagcggtggagggtcttggtgtgcaccgttt
aagacgtggcagagcatatacaactatgatataaccgatggtttggtcgatgaggaagag
aggaaactggtgttaggaggagaggtagcgttgtggtcagagcaagctgaccctacggtt
ttagactcaaggctatggccgcgtgcctctgcgtttgctgagagtttgtggtcagggaat
agagacgagagaggtgtgaagagatgtggtgaagctttggatcggttaaaccgttggagg
tatagaatggtgaagagagggattggtgctgaacctattcagccattgtggtgtttgaag
aatcctggcatgtgtaatgctgcagttcatagtgcttcacaagatttataa
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