Raphanus sativus (radish): 108862254
Help
Entry
108862254 CDS
T06014
Name
(RefSeq) regulatory-associated protein of TOR 1
KO
K07204
regulatory associated protein of mTOR
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108862254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108862254
Membrane trafficking [BR:
rsz04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
108862254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
HEAT
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
HEAT_2
Beta-prop_EML
HEAT_EZ
EIF3I
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108862254
NCBI-ProteinID:
XP_018491826
UniProt:
A0A6J0P5F9
LinkDB
All DBs
Position
5:complement(38199744..38208138)
Genome browser
AA seq
1340 aa
AA seq
DB search
MALGDLMVSRFSQSSVSLASSHRYDDEDCDSSISSRRKDSEAASSSIYGNDSTTERAATS
MAYLPQTIVLRELRHDASEASALLGTSDGIVLAPKWRLKERMKTGCVALVLCLNITVDPP
DVIKISPCARIEAWIDPFSMAPPKALETIGQNLSTQYERWQPRARYKVQLDPTSDEVKKL
CLTCRKYAKTERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLSISELDSWLKTPSIYV
FDCSAARMILNAFAELHDWGSSGSSGSSRDCIILAACDVHETLPQSVEFPADVFTACLTT
PIKMALKWFCRRSLLKEIIDESLIDRIPGRQNDRKTLLGELNWIFTAVTDTIAWNVLPHE
LFQRLFRQDLLVASLFRNFLLAERIMRSANCNPISHPMLPPTHQHHMWDAWDMAAEICLS
HLPQLVLDPNAEFQPSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRAL
VLLGRFLDMGSWAVDLALSVGIFPYVLKLLQTTTNELRQILVFIWTKILALDKSCQIDLV
KDGGHTYFIRFLDSSGAFPEQRAMAAFVLAVIVDGHRRGQEACLEANLIGVCLGHLEASI
PSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFQKLAPLLSEPQPEVRAAAVFAL
GTLVDIGFDSSKSVVEDEFDDDEKIRAEEAIIKSLLDVVSDGSPLVRAEVAVALARFAFG
HKQHLKSAASSYCKPQSSSLLTSLPSIAKLHDAGSAKLVSLHMSPLTRASTDSQPVAREA
KISSSPLGSAGLMNGSPLSDDSSLHSDSGIMHDSVSNGASHQQRLLDNAVYSQCVRAMFA
LAKDPSPRIASLGRRVLSIIGIEQVVAKPSKPTGRLGEAATTSHTPLTGLARSSSWFDMH
AGNLPLSFRTPPVSPPRSNYLLRRVCSLEFKPHLLGSPDSGLADPPLGVSGSERSLLPLS
TIYSWSCGHFSKPLLGGADASQEIVTKREEKEKFALEHIAKCQHSSITKLSNNPIANWDT
RFETGTKTALLHPFSPIVVAADENERIRVWNYEEATLLNGFDNHDFPDKGISKLCLINEL
DDSFLLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPSARDLNAVVDWQQQSGYLYA
SGEVSTVALWDLEKEQLLRSIPSESECGVTALSASQVHGGQLAAGFADGSLRLYDIRSPE
PLVCATRPHQKVERVVGLSFQPGLDLAKVVSASQAGDIQFLDLRTTKDTYLTIDAHRGSL
TALAVHRHAPIIASGSAKQLIKVFSLQGEQLGIIRYYPSFMAQKIGSVSCLTFHPYQVLL
AAGAADSFVSVYTHDNSQAR
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagacttaatggtatctcggttctcgcaatcctccgtttctttagcctcc
agtcaccgctacgacgacgaggactgtgattcgtcaatctcttcgcggaggaaagactcc
gaggctgcgagtagtagtatctacggaaatgacagcacgacggagagagccgccaccagc
atggcgtacttgcctcagactatcgtcctccgcgagcttaggcacgacgcctccgaggct
tctgcgctcttggggacttccgatggcattgtgttggctcccaaatggcggcttaaagag
cgaatgaaaacaggatgtgtagctctagttctgtgtttaaacattactgttgatccgccg
gatgttataaagatatccccttgtgcaagaatcgaggcttggatagacccattttccatg
gccccgccaaaagctctcgagactattgggcaaaatttgagcactcagtatgagagatgg
caaccaagggctcgatataaggttcagttggatccgacttcagatgaagtcaagaagctt
tgcttgacttgtcggaaatatgcaaaaaccgagagagttctattccactataatgggcat
ggtgtgccgaagcctacagctaatggtgaaatttgggtatttaacaagagttatacgcag
tacattccgttgtcaatcagtgagcttgattcctggttgaagacaccgtccatctacgtt
tttgactgctctgctgctaggatgattcttaatgcctttgctgagcttcatgattggggc
tcgtctggttcctctggatcctcaagggactgtattatacttgctgcttgtgatgtacat
gagacacttcctcagagcgttgaatttccagctgatgtttttactgcttgcctcacgaca
cctattaaaatggcgttaaaatggttctgccggcgttctcttctaaaagaaatcatcgat
gaatcacttattgacaggattcctggacgccaaaatgaccgtaagacattgttaggggag
ttgaactggattttcacggcagtgacggatacaattgcatggaatgtacttcctcatgaa
cttttccagagattattcagacaggatttgttggtcgccagcctttttcgaaatttctta
cttgctgagagaataatgcggtccgcaaattgtaatccaatatctcaccctatgctacct
cctacgcatcaacatcatatgtgggatgcatgggacatggctgctgagatctgcctttct
caccttccccaacttgttctggacccaaacgcagagttccagccaagtccattttttact
gagcaactgacagcgtttgaggtgtggcttgatcatggatctgagcataagaagccacca
gagcagttgcctattgttcttcaggtgttacttagccaatgccatcggtttcgtgctctt
gtgcttcttgggagatttcttgatatgggttcatgggccgtggatctggctttgtctgtc
ggaatattcccatatgtgctgaaacttctgcaaacaacaacaaatgagctaagacagatc
cttgttttcatatggacaaaaattcttgcacttgataagtcatgtcaaattgatcttgtg
aaggatggaggccatacatatttcataagatttctagatagctcgggtgcattcccagaa
caaagagctatggctgcttttgttctggctgtcattgtggacggacaccgacgaggccag
gaagcatgtcttgaagcaaatttgattggtgtttgtctggggcaccttgaagcatcgata
ccaagtgatccacagccagaaccattgtttctacaatggctttgcctttgtcttggaaag
ttgtgggaagattttatggaggcccaaataatgggtagggaggcaaatgcttttcaaaag
ttggcacctctgctttccgagccccaacctgaggtaagggctgctgctgtttttgccctg
ggtaccttagttgatattgggtttgactctagtaaaagtgttgtggaggatgaatttgat
gatgatgaaaagattagagcagaagaagctatcattaaaagtctcttagatgttgtctca
gatgggagtccacttgtccgggcagaggttgctgtagctcttgcacgttttgccttcggc
cacaaacagcacctaaagtcagccgcatcttcatattgcaagcctcagtcaagttctttg
cttacttcgctcccttcaatagctaaactccatgatgctgggagtgcaaaacttgtttct
ttacacatgagtcctctgactagagctagcactgatagccaaccagtggctcgtgaggcc
aagatctcaagcagccctcttggctcggctgggctgatgaatggatctccattatctgat
gattcttcgttacattctgattctggaatcatgcatgacagtgtcagcaatggagctagc
catcagcaaagactattggataatgctgtttattcgcagtgcgttcgagctatgtttgcc
ttagctaaagacccatctccacgtattgcaagtctcgggcggcgtgtgctttctatcatt
ggaatcgaacaagttgttgcgaaaccctcgaagccaactggccgattaggggaagccgca
acgacatctcacactcctcttactggcctagctcgttcatcctcatggtttgatatgcat
gcaggtaatctacccttaagttttaggactcctccggtcagccctcctagatcaaactat
ctactgaggagagtttgttcgctagagttcaaacctcatctgttgggttcaccagactca
ggattggctgatccgcctttaggcgtcagtggatctgaaaggagtttgctcccattatca
actatctacagctggagctgtggccacttttctaaaccgcttcttggtggggcggatgct
agtcaagagatagttaccaaaagagaagagaaagaaaaattcgcactcgagcatattgca
aaatgccaacattcctctattaccaagctcagcaataatcctattgccaactgggatacg
aggtttgaaacgggaacaaagacagctctccttcaccctttctctcctattgtagttgct
gcagatgagaatgaacggatcagagtctggaactatgaggaagcaactcttctcaatggc
tttgacaatcacgattttccagacaaaggaatttcaaaactctgcctcatcaatgaactt
gacgactcttttctacttgttgcatcatgtgatgggtcggtccggatatggaaaaactat
gcaacaaagggtaaacaaaagcttgttacggggttttcttcaattcagggtcacaagccc
agtgcacgtgacttgaacgctgttgtggactggcaacaacagtctggctacctgtatgct
tctggggaggtgtcaacagtcgcactttgggaccttgagaaagaacagcttctcagatct
attccctctgagtcagagtgcggggttacagcactttcggcttctcaagtgcacgggggt
caacttgctgctggtttcgctgatggatctttgagactctatgatattcggtcacctgaa
ccgcttgtctgtgcgactaggcctcatcagaaagttgaaagagtggttggactcagtttc
cagcctggacttgatctcgcaaaggtggtgagtgcatcacaggccggtgacatacagttc
cttgacctcagaacaacaaaggacacatacctgacgattgatgcacacaggggctcgctc
acggccttagctgttcacagacacgctccaataattgcaagcggatctgcaaaacagcta
attaaagtgttcagccttcagggagaacaactggggataatccgctactacccatccttc
atggcccagaagattggttcagtgagttgcctcacttttcatccgtaccaggttctgctt
gcagctggagctgcggactcattcgtctctgtatacacccatgacaactcacaagcaagg
tga
DBGET
integrated database retrieval system
