Raphanus sativus (radish): 108862302
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Entry
108862302 CDS
T06014
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108862302
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108862302
Meiosis-specific proteins
Cohesin complex and associated proteins
108862302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Laminin_II
SbcC_Walker_B
ATG17_like
Motif
Other DBs
NCBI-GeneID:
108862302
NCBI-ProteinID:
XP_018491893
UniProt:
A0A6J0P789
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All DBs
Position
5:24654143..24661966
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AA seq
1218 aa
AA seq
DB search
MPAIQSPPGRILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRT
GQLRGSQLKDLIYAFDDREKEQRGRRAFVRLVYLLDDGVELRFTRTITSSGGSEYRIDNR
VVNLEEYNGKLKSIGILVKARNFLVFQGDVESVASKNSKELTGLIEQISGSDELKKEYEE
LEEKKASAEEKAALIYQKKKTIGAEKKLKKAQKEEAEKHLKLQDELKALKREHFLWQLYN
IENDIEKANEDVDAEKNNRKDVMAKLEKFEHEARKRKVEQAKYLKEIAQREKKIAERSSK
LGKYQPELLRLKEEIARIKSKIESSRKEVDKRKKEKGKHSKEIEQMQKSIKDLNEKMNEL
NERRQDSSGKLPMLDSQLQEYFRIKEEAGMKTIKLRDEKEVLDRQYHTDLEALRNLEENY
QQLINRENDLDEQIERMKSRQKEIEDSSSEYKNETASLKKQLRALQEKHRDARNASEKLK
TRIAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRKKYNLAVT
VAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKPVLERLRNLDGTAKLA
FDVIQFDPELEKAVLFAVGNTLVCDDLDEAKRLSWTGERFKVVTVDGILLTKAGTMTGGT
SGGMEAKSNKWDDKKIEGLMKKKEEYELELEKVGSIRDMQIKESEISGKISGLEKKIQYA
EIEKKSIQDKLPHLEQEKRNITDESRRINVELSKSRAEVDKRNTEIRKLEKRINEIVDRI
YRDFSQSVGVANIREYEEKQLKEAQEVAEERLNLSNQLAKLKYQVEYEQNRDVGSRIRKL
ESSISSLETDLENIQKRKSELKELTEKATNEINNWKKEMGECKQKAEEYEKEILDWKKQA
SQATTSITKLNRQINSKETQIEQLISQKQEIVEQCELERIALPVLSDAAEEDDSDGPQFD
FSELDRAHLQERRPSARDKMDAEFRQKIESKSSEIERTAPNLRALDQYEAIQEKEKQVSQ
EFEAARKEEKQVADAYNAVKQKRYELFMEAFNHISNIIDKIYKQLTKSNTHQLGGTAYLN
LENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEVD
AALDNLNVAKVAQFIRSKSCQAARDNQDAEDGHAFQSIVISLKDSFYDKAEALVGVYRDV
DKSCSSTMSFDLRNYAES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatccaatccccaccggggaggatcctgcagctcgagatggagaatttcaag
tcctacaagggccaccagctagtaggtccgttcaaggacttcacggcgatcatcggtccc
aacggcgccggcaaatcaaacctgatggacgcgattagcttcgtcctcggagttcgcacc
ggtcagctccgtggatctcagctcaaggatctgatctacgccttcgacgaccgagagaag
gagcagagagggaggagagcgttcgtccgcctcgtctatctcctcgacgacggagtggag
cttcgtttcactcgtacgattaccagctctggtgggagcgagtatcgtattgataatagg
gttgtgaatttggaagagtataatgggaagctgaagtctatagggatacttgttaaggct
cgtaacttcttagtgtttcagggtgatgttgagtctgttgcttccaagaattcaaaagaa
ctcactggacttatcgagcagatttctggctctgatgagcttaagaaagagtacgaggag
ttggaagagaagaaggccagcgctgaagagaaagcagctcttatatatcagaagaagaaa
actattggggctgagaagaagctgaagaaagcacagaaggaagaagctgagaagcatctg
aagctgcaagacgaactgaaagctctgaagagagaacacttcctgtggcaattatataac
attgagaatgatatcgagaaggcaaatgaagatgttgatgctgaaaagaacaatcgtaaa
gatgtcatggcaaagctggagaagtttgagcatgaagctcgtaagagaaaggtagaacaa
gccaagtatttaaaagaaattgctcaacgtgaaaagaagattgctgagagaagctcgaag
cttggaaaataccaacctgagcttctgagattgaaggaggagatagctcgcataaaatct
aaaattgagagcagtcgaaaggaagtggataagaggaaaaaagaaaaagggaagcattcc
aaagaaattgaacagatgcagaaaagcattaaggatctgaatgagaagatgaacgaatta
aacgagaggagacaagatagcagcggaaaactcccaatgcttgacagtcaactgcaagag
tattttcgaataaaagaagaagctgggatgaaaaccattaagctcagagatgagaaagag
gtgctagataggcaatatcatactgatctcgaagcattgagaaatctggaagaaaattac
cagcaactgataaatagggagaatgatcttgatgaacagattgagcgaatgaaatccagg
caaaaagagattgaagattcatcctcggaatataagaacgaaacagctagtctaaaaaag
cagttacgagcactgcaagaaaagcaccgagatgccaggaatgcatctgagaaattgaag
actagaatcgcagaattggaagaccagttaagtgatctaacggctgaaagatatgaaaat
gagagagatagcaggctaacgcaggctgttgagtctctcaagcgtctatttcaaggagtt
catggtcgaatgactgatctgtgtcgacctaatcggaagaagtacaaccttgcagttact
gttgctatggggagatttatggatgcagttgttgtagaagatgaaaacacaggaaaggac
tgcatcaagtacttgaaagagcaaaggcttcctcctatgacatttattcctcttcagtca
gtacgtgtcaagccagtgcttgaaagattgagaaatttggacggcacagcaaagctggcg
ttcgatgttatccagttcgatcctgagttagagaaggcagtcctctttgctgttggaaat
actcttgtctgtgacgaccttgatgaagccaaacgtcttagttggactggagagagattt
aaagttgttactgttgatggaatattactcacaaaagcgggaacaatgactggtggtacc
agtggtggaatggaagcaaagtctaacaaatgggatgacaagaaaattgaaggactgatg
aaaaagaaagaagaatatgaactggaactggaaaaggttggatctattcgagatatgcag
ataaaggagtccgaaatatcgggtaaaataagtggacttgaaaaaaagattcagtatgcc
gagattgagaagaaaagcatccaagataaacttccacatcttgagcaagagaaacggaat
attactgacgaaagtaggcgcatcaatgttgaactttctaagtcaagagctgaggttgat
aagaggaatacagaaatcaggaagttggagaaaagaatcaatgagattgtggaccgtatc
tatagggattttagccagtctgttggtgttgccaatatacgtgaatatgaagaaaaacag
ctcaaggaggctcaagaagtggcggaagaaaggctgaatctgagtaaccagcttgctaag
ttaaagtaccaggtggaatatgagcaaaaccgagatgtggggtcacgaattcgaaagcta
gaatcttctatcagttcgttggaaactgatttggagaacatacagaagaggaagtccgaa
cttaaggagttaacagaaaaagctactaatgaaatcaacaattggaaaaaggaaatggga
gaatgcaaacaaaaagcagaagagtatgaaaaagaaattctggattggaaaaagcaggct
tctcaagcgacaacaagcataaccaaactcaatcgtcagataaactctaaggaaacgcaa
attgagcagctgatctcgcaaaaacaggaaatagttgagcagtgtgagcttgaacgtatt
gcgcttcctgttttatcagatgctgcggaggaagacgactcagatgggccacagtttgac
tttagtgagttggatagagctcatctccaagaacggagaccatctgctcgtgacaagatg
gatgcggaatttaggcagaaaatagaatcgaaatcatcagagatcgaaagaacggcccca
aacttgagagctcttgaccagtatgaggctatacaagagaaagaaaaacaagttagccaa
gagtttgaagctgccaggaaagaggagaaacaagtagcggatgcatacaatgctgttaag
cagaagaggtatgagctatttatggaagcgttcaaccacatttctaatatcattgataag
atctacaagcagctaaccaagagtaatacgcatcaattgggtgggactgcttatctaaac
ttggagaatgaggatgatccgtttctacatggtataaagtatactacaatgcccccgaca
aagcgtttccgtgacatggaacagctctctggaggagagaaaacagttgcggctttggct
ttgctcttctccatccatagctataggccttcgcctttcttcatactggatgaagtggat
gctgcgctcgataatttaaacgttgcaaaagtcgctcagtttatacgtagcaaatcctgc
caagccgcacgtgacaaccaggatgcagaggacgggcatgccttccaaagcattgtaata
tctctcaaggacagcttctatgacaaggctgaagctctggttggagtttacagagacgtc
gataagagttgctcgagtacgatgtcttttgaccttaggaactacgcagagtcgtga
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