Raphanus sativus (radish): 108862342
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Entry
108862342 CDS
T06014
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
rsz04145
Phagocytosis
rsz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108862342
04145 Phagocytosis
108862342
04148 Efferocytosis
108862342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108862342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108862342
04031 GTP-binding proteins [BR:
rsz04031
]
108862342
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
108862342
Endosome - Lysosome transport
108862342
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108862342
Exosomal proteins of other body fluids (saliva and urine)
108862342
Exosomal proteins of colorectal cancer cells
108862342
Exosomal proteins of bladder cancer cells
108862342
GTP-binding proteins [BR:
rsz04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108862342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
ATPase
G-alpha
AAA_7
DAP3
FeoB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
108862342
NCBI-ProteinID:
XP_056867397
UniProt:
A0A9W3DUD2
LinkDB
All DBs
Position
5:24810708..24813101
Genome browser
AA seq
202 aa
AA seq
DB search
MGCAASLPGKNSGALNGLTSSENAAPADAKNLRVKLVLLGDSGVGKSCIVLQFVRGQFDA
TSKVTVGASFLSQTITLQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE
SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVLSEDGMELAEKNGMFFIETSAKT
ADNINELFEEIGKRLPRPSQPS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtgctgcttctcttccaggcaagaactctggagctttaaacggtcttaccagc
tcagagaatgcagctccagcagatgctaagaatctacgcgtgaagttagttctattagga
gattctggtgtgggtaaaagttgtattgtcctccagtttgtccgtggtcaatttgacgca
acatctaaggtaactgttggagcttcattcttgtcccaaacaataaccttgcaagactct
accacagtgaagtttgaaatatgggatacagcagggcaagagaggtattctgcgcttgct
ccactatactaccgtggagctggagttgctgttattgtgtatgatattacaagccctgag
tcgttcaagaaagctcagtattgggttaaggaactgcagaagcatggaagcccagacatt
gtgatggctttggttggtaacaaagctgatctgcatgaaaaaagagaagtactctccgag
gatggtatggagcttgcggagaagaacggcatgttctttattgaaacgtcagctaagacg
gcagataacataaatgaactgtttgaggaaattggaaagaggctacctcgtccctctcaa
ccatcatga
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