KEGG   Raphanus sativus (radish): 108862342
Entry
108862342         CDS       T06014                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04144  Endocytosis
rsz04145  Phagocytosis
rsz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108862342
   04145 Phagocytosis
    108862342
   04148 Efferocytosis
    108862342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108862342
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108862342
   04031 GTP-binding proteins [BR:rsz04031]
    108862342
Membrane trafficking [BR:rsz04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    108862342
 Endosome - Lysosome transport
    108862342
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108862342
  Exosomal proteins of other body fluids (saliva and urine)
   108862342
  Exosomal proteins of colorectal cancer cells
   108862342
  Exosomal proteins of bladder cancer cells
   108862342
GTP-binding proteins [BR:rsz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    108862342
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase G-alpha AAA_7 DAP3 FeoB_N AAA_16
Other DBs
NCBI-GeneID: 108862342
NCBI-ProteinID: XP_056867397
UniProt: A0A9W3DUD2
LinkDB
Position
5:24810708..24813101
AA seq 202 aa
MGCAASLPGKNSGALNGLTSSENAAPADAKNLRVKLVLLGDSGVGKSCIVLQFVRGQFDA
TSKVTVGASFLSQTITLQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE
SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVLSEDGMELAEKNGMFFIETSAKT
ADNINELFEEIGKRLPRPSQPS
NT seq 609 nt   +upstreamnt  +downstreamnt
atgggatgtgctgcttctcttccaggcaagaactctggagctttaaacggtcttaccagc
tcagagaatgcagctccagcagatgctaagaatctacgcgtgaagttagttctattagga
gattctggtgtgggtaaaagttgtattgtcctccagtttgtccgtggtcaatttgacgca
acatctaaggtaactgttggagcttcattcttgtcccaaacaataaccttgcaagactct
accacagtgaagtttgaaatatgggatacagcagggcaagagaggtattctgcgcttgct
ccactatactaccgtggagctggagttgctgttattgtgtatgatattacaagccctgag
tcgttcaagaaagctcagtattgggttaaggaactgcagaagcatggaagcccagacatt
gtgatggctttggttggtaacaaagctgatctgcatgaaaaaagagaagtactctccgag
gatggtatggagcttgcggagaagaacggcatgttctttattgaaacgtcagctaagacg
gcagataacataaatgaactgtttgaggaaattggaaagaggctacctcgtccctctcaa
ccatcatga

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