KEGG   Raphanus sativus (radish): 108862447
Entry
108862447         CDS       T06014                                 
Name
(RefSeq) receptor for activated C kinase 1B
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03010  Ribosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108862447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108862447
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108862447
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     108862447
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108862447
  Exosomal proteins of colorectal cancer cells
   108862447
  Exosomal proteins of bladder cancer cells
   108862447
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd DSE1_N NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd ASA1 Beta-prop_VPS8 CFAP251_N Beta-prop_WDR41 Beta-prop_Aladin TRM82_WD Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st PROPPIN Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Tricorn_2nd eIF2A Cytochrom_D1 DUF7899 WD40_RFWD3 Beta-prop_pof12 Beta-prop_WDR11_2nd Utp8_b_propeller
Other DBs
NCBI-GeneID: 108862447
NCBI-ProteinID: XP_018492088
UniProt: A0A6J0P7S1
LinkDB
Position
5:complement(28981187..28982662)
AA seq 328 aa
MADGLVLKGTMCAHTDMVTAIATPVDNSDMIVTSSRDKSIILWKLNKDEKSSYGVAQRRL
TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGESSRRFVGHKKDVLSVAFSTDNRQ
IVSASRDGTIKLWNTLGECKYTISDEGEGHKQWVSCVRFSPNTLVPTIVSASWDHTVKVW
NLSNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGAILLWDLAEGKKLYSLEAGSIIH
SLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKSDVSAGTGNKTKVIYCT
SLNWSADGNTLFSGYTDGVIRVWGIGRY
NT seq 987 nt   +upstreamnt  +downstreamnt
atggctgacggactcgtcttgaaaggcaccatgtgcgcccacaccgacatggtcaccgcc
atcgccacccccgtcgacaactcagacatgatcgtcacctcttcccgcgacaagtccatc
atcctctggaaactcaacaaggacgagaaatcatcctacggcgtcgctcagcgccgcctc
accggtcactctcacttcgtggaagacgtcgtcctctcctccgacggacagttcgctctc
tccggcagctgggacggcgagctccgtctctgggatctcgccacgggcgagtccagccga
cgtttcgtggggcacaagaaagacgttctctccgtcgctttctccactgataaccgtcag
atcgtgtctgcttctcgcgacggcacgatcaagctgtggaacacgcttggagagtgtaag
tacacgatctccgacgaaggtgagggacacaagcaatgggttagctgtgttaggtttagt
cccaacacgcttgtgcctaccattgtgtctgcttcttgggatcacaccgtgaaggtttgg
aatctctccaactgtaagcttaggaacactctcgctggccactctggttacttgaacact
gtggctgtttcgcctgatggttcgttgtgtgctagtggtgggaaagatggcgcgattttg
ctttgggatttggctgaagggaagaagctttactctcttgaggctggctcgattattcac
tctctttgcttcagtcccaataggtactggttgtgtgcggcgactgagaatagtattagg
atttgggatcttgagagcaagagtgttgttgaagatttgaaggttgatcttaaggctgag
gctgagaagtctgatgtttctgctggaaccggaaacaagacaaaggtgatctactgcaca
agcttgaactggagtgcagatggaaacacattgttcagtggatacacagatggagtcatc
agggtttggggtattggtcgttattag

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