Raphanus sativus (radish): 108862458
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Entry
108862458 CDS
T06014
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108862458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108862458
03036 Chromosome and associated proteins [BR:
rsz03036
]
108862458
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108862458
Coactivators
SAGA/TFTC/STAGA complex
108862458
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108862458
STAGA complex
108862458
TFTC complex
108862458
SAGA complex
108862458
SLIK complex
108862458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
108862458
NCBI-ProteinID:
XP_018492100
UniProt:
A0A6J0P628
LinkDB
All DBs
Position
5:complement(3532887..3535955)
Genome browser
AA seq
531 aa
AA seq
DB search
MEQPRQTPTASQPPETPPPAPEPAPKPAVLSQIQQPPPANPNPSSASSISSSPAPNPNPN
PPQYARPVTSPATQHLPQPLNRPPPPSYSRPWQPHSPYAQFSSSSSSSAPASSSSSSSLP
VTGQQQRGGMAIGVPASPIPTPSQPPPPSAFPGSFGQQYGGLGRGTVGMSEAGSNPSVPP
QGRMMQGTQGMMGTIGSGSQMRPSGIMPQHQQRPGQASLRPASSPSSPSPVPQNFQAHGL
MRPSSIGSPGVQSTGAAQHSLQATNQPWLSSSAQGKPPLAPPSYRPQVNNNPSSMQQRSH
VTQQHLSTSPATSQPQQQQQQQQHQLQPQEQHQQLRPPHQTLPYSHQPARVQGLVNQKAA
SPAMPTPPPVPQPGNQAKPVSAENEESDDRILGKRSIHEILQQIDPSEKLDPEVEGILAD
IAEDFVESITTFGCSLAKHRKSDTLEAKDILLHVERNWNIRPPGFSSDEIKTFRKPLATD
IHKERLAAVKKSVTVTEAANARNPFGHGTANARGGQGKTPANPLASTTFNH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaccccggcaaacccccacggcgtctcagccaccggaaacaccgcctccagcg
ccggagccagctccgaaaccggcggttctatcccaaattcaacaacctcctcccgccaat
ccgaatccctcatccgcgtcctctatttcttcttctccagcccccaatccaaaccctaat
ccccctcaatacgcacgcccggtgacatctccagcgacgcaacacctcccgcagcctcta
aatcggcctcctccaccgtcgtactcgagaccatggcagccgcattccccatacgctcag
ttctcctcctcctcctcctcatcagctccggcctcttcgtcttcttcgtcctcattgcct
gtcaccgggcagcagcagagaggcggtatggcgatcggcgttccagcttctccgatcccg
acgccttctcagcctcctccgccttctgcttttccgggctcctttggacagcagtacggc
ggattgggccgtggaaccgtcggaatgtcggaagcgggttcgaatccaagtgtccccccg
cagggtaggatgatgcaaggaacgcagggaatgatggggacgattgggtcaggctctcaa
atgcggccaagtggaataatgcctcagcaccagcagagaccgggtcaagcctctctaaga
ccagcttcctctcccagtagtccatctcctgttcctcaaaactttcaagcgcatggcctt
atgagaccttcatctattggttctcctggtgtccaatctactggtgcagcacagcacagc
ttgcaagccactaatcaaccatggttatcatcttctgcccaagggaagccgcctttggca
cctccttcttatagaccgcaagtaaataataatccctcctccatgcaacaaagatctcac
gttactcagcagcatctttccacgtcaccagctacttcacagcctcagcagcagcaacag
caacaacaacatcagcttcagcctcaagagcaacatcaacaattgagacctccgcatcag
actttaccttactcacatcaaccggcccgggtccaagggttggtaaatcagaaagctgct
tctccagcaatgccgaccccgccccctgtgcctcaaccaggaaaccaagctaagccagtt
tcagcagagaatgaggagtctgatgatcgtatcctggggaaaagaagcatccatgagata
cttcaacagatcgatccgtcagagaaattggatccagaggttgaaggcatccttgctgat
attgctgaagactttgtggagtcaatcacaacttttggatgttctttagccaagcataga
aagtctgatactctagaggccaaagacatcttgctccatgttgaaagaaactggaatatc
aggcctcctggttttagcagtgacgagatcaagacatttcgaaagccactggcaacagat
attcacaaagagagacttgccgctgtaaagaagtctgtgacggtaacggaagcagcaaac
gccaggaatccgtttgggcatggaacagctaatgcaagaggaggccagggaaagacgcca
gctaatcccttggcctctacaacttttaatcactga
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