Raphanus sativus (radish): 108862497
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Entry
108862497 CDS
T06014
Name
(RefSeq) bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic isoform X1
KO
K13832
3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:
4.2.1.10
1.1.1.25
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rsz00999
Biosynthesis of various plant secondary metabolites
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01230
Biosynthesis of amino acids
Module
rsz_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
108862497
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
108862497
Enzymes [BR:
rsz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.25 shikimate dehydrogenase (NADP+)
108862497
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.10 3-dehydroquinate dehydratase
108862497
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Ortholog
Paralog
GFIT
Motif
Pfam:
DHquinase_I
Shikimate_dh_N
Shikimate_DH
SDH_C
FAD_binding_2
Sacchrp_dh_NADP
F420_oxidored
AdoHcyase_NAD
KARI_N
2-Hacid_dh_C
AlaDh_PNT_C
adh_short
NAD_binding_7
GIDA
Pyr_redox_2
NAD_binding_2
DAO
3HCDH_N
HI0933_like
Motif
Other DBs
NCBI-GeneID:
108862497
NCBI-ProteinID:
XP_018492148
UniProt:
A0A6J0P7Y5
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All DBs
Position
5:38882439..38885618
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AA seq
611 aa
AA seq
DB search
MASSSTNARLTNPPPHLLSTPRPSPTSVANLRLPAADFPLLFKSNLFSSAELSSLRIRSV
PVPVVFSDRRLLRSMKSSNVYVASDSMETEIGSQKLAKNPSLICAPVMADSVDKMVVETC
KAQDLGADLVEIRLDSLKEFNPLEDLKIIIQKSPLPTLFTYRPKWEGGQYEGDEKERLDV
LRLAMELGAEYIDVELQVASEFIKSIKGKKPANFRVIVSSHNYESTPSVEDLNDLALRIQ
QSGADIVKIATTAVDIIDVARMFHLTSNAQVPTIGLVMGERGLMSRILCSKFGGYLTFGT
IESGKVSAPGQPTIKELLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIIHNQAFKSVDFDG
VYVHLLVDDLASFLKTYSSSDFAGFSCTIPHKEAALKCCDEVDPLAKSIGAVNTILRRQS
DGKLLGYNTDCIGSISAIEDGLRRSSDPSSVPSSSSSPLAGKTVVVIGAGGAGKALAYGA
KEKGAKVVIANRTYERALELAEAIGGRALALKDLDNFHPEDGMVLANTTSMGMQPNVNET
PISKDALKHYALVFDAVYTPRITRLLREAEECGAITVSGSEMFVRQAYEQFEIFTGLPAP
KELYWQIMSKY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttccactaatgctcgcctcaccaaccctcctcctcatctactctccact
ccacgaccgtcaccaacatccgtcgccaacctccgtcttcccgccgccgattttcctctc
ctctttaaatcgaacctcttctcctccgccgaactatcttccttgcgtatcagaagcgtg
ccggttccggtagtattctccgatcgacggctactacgatccatgaagtcaagcaatgtc
tatgtggcttcagattctatggaaacggagattggaagtcaaaaacttgcgaaaaatccg
agcttgatctgtgctccggtgatggcggattcagtagacaagatggtggttgaaacttgc
aaagctcaggacttgggtgcagatttggtggagattcgattagatagtttgaaagagttc
aaccctcttgaggatctgaaaattataatacagaagtctcctcttccaactctattcacc
tacaggccaaaatgggaaggtggtcaatacgaaggtgatgaaaaagagcggctagatgtg
ctccgtttagccatggaacttggagctgagtacattgatgttgaacttcaggttgcaagc
gagttcatcaagtcgattaaaggaaagaagcctgcaaatttcagagtaattgtttcttca
cataactatgagagcaccccttccgttgaggatctcaatgacctcgctctaagaatacaa
caatctggagctgacattgtgaaaatcgctactacggctgtggacatcatagatgttgct
cgcatgttccatttaacctcaaatgctcaagttccaacaataggacttgtgatgggggaa
agaggtctaatgtcacggattctctgctccaaatttggtggatatttaacctttggcacc
atagaatccggaaaagtttctgcgcctggtcaaccgacgatcaaggaactgttggatctt
tacaatttcagaagaatcggtcctgacactaaggtgtatggaatcattgggaagcctgtc
agtcacagcaaatcacctattattcacaaccaagctttcaaatcagttgattttgatgga
gtgtatgttcacctcttagttgatgatcttgcaagcttcctcaaaacatactcatcctct
gatttcgctggattcagctgtacaatccctcacaaagaagctgcgttgaaatgttgtgat
gaggttgatccattggcaaagtctataggagctgtgaacactatactaagaagacaaagc
gacggaaagttgctgggttacaacaccgattgtattggttccatttctgctattgaggat
gggcttagaaggtcaagtgatccaagcagtgtaccttcttcttcttcttcgccgttggct
ggtaaaacagtggtggttattggtgctggtggagcaggtaaagcacttgcttatggtgca
aaagagaagggagccaaagttgtgattgctaatcgaacttacgaacgagcactagaactc
gcagaagcaattggaggcagagcgttagctctcaaggatttagacaacttccacccagaa
gatggcatggtattggccaacacaacgtctatggggatgcaaccaaacgttaatgagact
cccatttccaaggatgcattgaagcactacgcactagtgtttgatgcggtttatactcca
agaatcacacgactgttgagggaagcagaagaatgcggagccataacagtgtcggggtca
gagatgtttgtgaggcaggcttacgagcagtttgagattttcaccggtttgcctgctcca
aaggaactctactggcaaatcatgtcaaagtactga
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