Raphanus sativus (radish): 108862527
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Entry
108862527 CDS
T06014
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108862527
03036 Chromosome and associated proteins [BR:
rsz03036
]
108862527
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108862527
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108862527
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108862527
microRNA pathway
RISC loading complex
108862527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108862527
NCBI-ProteinID:
XP_018492188
UniProt:
A0A6J0P826
LinkDB
All DBs
Position
5:complement(28954210..28960308)
Genome browser
AA seq
1084 aa
AA seq
DB search
MVRKKRTDGQFEGGEGSGSREAAPASAGGYQQGRGGGGQQQGGRGYGPHSQQGGRGRGYG
QPQQQHGGARGGQPPQQQQYGGPRRGQPPQQQQYSGPRGGQPPQQQQYGGPREGQPPQQQ
HQQYGGPRGGPPRGGGRGGASSAGLPQRQSVPDLHQANLPTHQAVSSQPTPSEVSLTQMP
DPPAPVQEFEQLSIEQGASSQAIQPIASSSKACKFPPRPGKGQVGKRIMVKANHFFAELP
DKDLHQYDVTITPEVTSRAVNRAVMKQLVDLYKETHLGRRLPAYDGRKSLYTAGPLPFVS
KEFRILLQDEEEGAGGQRREREFKVVIKLAARADLHHLGLFLQGKQADAPQEALHVLDIV
LRELPTSKYTPVGRSFYSPHIRTKQSLGDGLESWRGFYQSIRPTQMGLSLNIDVSSTAFI
EALPVTEFVCWLLGRDIRSRPLSDADRVKIKKALRGVKVEVNHRGNMRRKYRISGLTAVA
TRELTFPVDERNTQKSVVEYFYETYGFLIQHTQLPCLQVGNSNRPNYLPMEVCKIVEGQR
YSKRLNERQITALLNVTCQRPQEREKDILNTVGLNDYDKDPYAKEFGIKISASIASVEAR
ILPAPWLKYHDSGKEGACLPKVGQWNMMNKKMIDGGTVSNWICVNFSRQVPDDLARAFCQ
GLAQMCHTSGMAFNPEPVLPPVNARPEQVEKVLKTQYNDAMAKLSKGKEIDLLIVILPDN
NGSLYGDLKRICETELGIVSQCCLTKHVFKMSKQYMANVALKINVKVGGRNTVLVDALSR
RIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPQITKYVGLVCAQANRQELIQ
DLFKEWKDPQKGVVTGGMIKELLLAFYKSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAI
RKACASLEAEYQPTVTFVVVQKRHHTRLFAHDHKDVRSVDRSGNILPGTVVDSSICHPTE
FDFYLCSHAGIKGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAYY
AHLAAFRARFYMEPETSDSGSMASGSMARGGGMGGRNTRGPNVNAAVRPLPPLKDNVKRV
MFYC
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaactgatggtcagtttgaaggaggtgaagggtctggttcccgt
gaagctgctccagcctcagctggtggttatcagcaggggagaggaggaggaggacagcag
caaggtggaagaggttatggtcctcattctcaacagggaggtcgcggtcgtggatatggc
caaccacaacagcagcacggtggagcaagaggaggccaaccaccacaacagcagcagtac
ggtggaccaagaagaggtcaaccgccacaacagcagcagtacagtggaccaagaggaggt
caaccaccgcaacagcaacagtatggtggaccaagagaaggccaaccaccacaacagcag
caccaacagtacggtggaccaagaggaggacctcctcgaggtggtggtcgtggaggtgca
tcctctgctggactgccccagagacaatcagttcccgatctgcatcaagctaacttacca
actcatcaagcggtgtcttctcagcctacaccgtctgaggtgagtcttactcagatgccg
gatcctcctgctccggtacaagaatttgaacagctctctattgaacaaggagcttccagt
caagcaatccagcccattgcatcttccagcaaagcttgtaagtttccaccgaggcctggt
aaaggacaggtcggcaagcgaatcatggtaaaggccaaccacttctttgccgagttgcct
gataaagatttgcaccagtatgacgtaaccattactccggaagttacatcaagggctgtt
aatcgtgccgtgatgaaacagttggttgacttgtacaaagaaacacatcttggaaggcgt
cttcctgcatatgatgggcgaaaaagtctgtacactgctggaccgcttccgtttgtttcg
aaggaattcagaatcttacttcaggacgaggaagaaggggctgggggacaaagacgagaa
agggagttcaaagttgtgatcaagctagctgcccgtgctgatctacatcacctaggattg
tttttacagggaaaacaagctgatgccccgcaggaggctcttcatgttcttgacattgtt
cttcgtgagctgccaacctccaagtatactcctgtgggccggtcattttattctccgcat
ataagaacaaagcaatcattgggggatggcttggagagctggcgtggattctatcaaagc
attcgtcctacacagatgggcttgtcactcaacattgatgtgtcatctacagcattcata
gaggcacttcctgttaccgaatttgtctgctggttgctgggtagggatattagatcccgg
cctttatctgatgctgatcgtgtcaagataaaaaaggcgcttagaggtgtaaaggttgaa
gtgaaccatagaggaaacatgcgccgaaagtaccgcatttcgggcctgactgctgtggcc
actcgagaactgacatttcctgtggatgaaagaaatacccagaaatctgttgttgaatac
ttctacgaaacatatggctttctcattcagcacacgcagctaccatgcttgcaagttggg
aattctaacaggccaaattatttgccaatggaggtctgcaagattgttgagggccagagg
tactcaaaaaggttgaacgagagacagatcactgctctgctgaatgtgacttgtcagcgc
ccccaagaacgtgaaaaagatatcttgaatacggtagggctcaatgattatgataaggat
ccctatgctaaggagtttggcatcaagataagcgcatccattgcttctgttgaggctcga
attctgcctgctccatggctcaagtatcatgattctggaaaggaaggggcttgtctgccg
aaagttggacaatggaatatgatgaataagaaaatgattgatggaggtacagtgagcaac
tggatctgcgtcaacttctctaggcaagtgcctgacgatctggcacgtgctttctgtcag
ggacttgctcagatgtgccacacctctggaatggcatttaatccggaaccagtccttcca
ccagtcaatgctcgccctgagcaagtcgagaaagtcttgaaaactcaatataatgatgcc
atggccaagctctctaaaggaaaagagattgatctccttattgtcatcctcccagacaat
aatggatcactatatggtgatctgaagcgcatctgtgagaccgaactcggcattgtgtct
cagtgctgcctgactaagcatgtctttaagatgagcaaacagtatatggctaacgtggct
ttgaaaattaatgtcaaagttggaggaaggaatactgtacttgttgatgccttatctagg
cgaattcctctagtcagtgatcgccccaccataatcttcggtgctgatgtaacacatcct
catcctggagaggactcgagcccgtccattgctgccgtcgtcgcttcccaagactggccc
caaattacgaaatatgttggtttggtttgtgctcaagcgaatagacaggagctcattcag
gatctcttcaaagaatggaaggacccgcagaaaggggtagtgaccggtggcatgattaag
gagttacttctcgccttctataaatcaactggtcataagccgttaaggatcatattctac
agggatggagtcagtgaaggacagttttatcaggttctgctctatgagcttgatgccatc
cgcaaggcatgtgcttcgctggaagcagagtatcagccaacagtaacgtttgtggtggtg
cagaagcgccatcacacgagactatttgctcatgatcacaaggacgtcagatcagtggac
agaagtggaaacatattaccaggaaccgtcgtggattccagtatctgtcatcccacggag
ttcgacttttacctctgtagccatgctggtattaagggcacttcccgacctgctcattac
cacgttctttgggatgagaacaacttctctgcagatggactccaatctctgaccaataac
ttgtgctacacgtatgcgagatgtactcgttctgtatccattgtgccgcctgcgtattat
gctcatctagcagcgttcagggctcggttctacatggagccagagacatcagacagtggt
tcgatggctagcgggagcatggcacggggaggtggcatgggtggtagaaacacacgtggg
ccaaacgtgaacgctgcagtgagaccactcccacctctaaaagataatgtgaagcgcgtg
atgttctactgctga
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