Raphanus sativus (radish): 108862612
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Entry
108862612 CDS
T06014
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108862612
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108862612
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
AAA_15
RsgA_GTPase
MMR_HSR1
AAA_23
AAA_14
AAA_16
AAA_28
Zeta_toxin
AAA_30
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
108862612
NCBI-ProteinID:
XP_018492301
UniProt:
A0A6J0P6Q9
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Position
5:complement(39198044..39200815)
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AA seq
594 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKSAASKSAATSSNGVDSLSSGVDALQISDRTCTGILC
SHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGLRELPI
PDHMDIYHLSHEIEATDMTSLEAVMSCDEERLKLEKEIETLVEQDDGGGERLDTIYERLE
AMDAATAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTN
HLDLEACVWLEESLKNFERILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQYCQTR
SELEENQMKQYRWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVAR
DSVLVFRFADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKST
LLKLMTGELHPTEGMVRRHNHLKIAQYHQHLAEKLDLEVPALIYMMNEFPGNEEEKMRAA
IGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEAL
NEWDGGLVLVSHDFRLINQVAHEIWVCEKQCITKWNGDIMDFKKHLKAKAGLED
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgctagcaagaagaaggccgctcagaagaaagccgccgccgccgccaaa
agaggcggtaaatccgccgcgtccaaatccgctgctacttcttccaacggagtcgacagc
ttgtcgagcggcgtcgacgcccttcagatatccgaccggacctgtaccggaatcctctgc
tctcatcctcaatcgagagatattcgtatagagtcgttgtctgttacgtttcatggctac
gacctcatagttgattcgatgctggagcttaactacggaaggcgttacggtctcctcggg
ttgaacggttgtgggaagtccactcttttaaccgcgattggactcagggagctcccgatt
cctgaccacatggatatctatcatctctcccacgagattgaagccactgacatgacttct
ctcgaggctgtcatgagctgtgacgaggagaggttgaagctggagaaggagattgagact
ctcgttgagcaggatgatggaggtggagagcgtcttgatacgatctatgagcggttagag
gctatggatgctgctactgcggagaagcgtgctgctgagattctgtttggtcttggtttc
gacaaggagatgcaggctaagaagactaaggatttttctggtggttggaggatgagaatt
gctttggcgagagctctcttcattatgccaactatccttttgcttgatgagccgaccaat
catttagatttggaagcttgtgtctggttagaagagagcctgaagaactttgagcgtatc
cttgtggtggtatcccactcacaggattttttgaacggagtgtgtaccaacatcatccac
atgcaaagcaagcagctcaagtattacactggtaacttcgatcagtactgccagacacgt
tccgagctagaagagaatcagatgaaacagtacagatgggagcaggagcagatctcccac
atgaaggagtacattgctcggttcggtcacggttcagccaaactcgctcgtcaagctcag
agcaaggagaagactttggcaaagatggagagaggtgggctcacagagaaggtggcaaga
gacagtgttctcgttttccgttttgctgatgtcgggaagcttccacctccagtgcttcag
tttgtggaagtgtctttcgggtacacgccggactatcttatatacaagaacatcgacttt
ggtgttgacttggactcgagggttgctcttgttggacccaacggagctgggaagagtact
ttattgaagttaatgactggtgagctgcacccaacagaaggaatggtgaggcgtcacaac
cacttgaagattgctcagtaccatcagcatctagctgagaagctagacctggaagtgcct
gcgcttatctacatgatgaacgagtttccaggcaacgaagaggagaagatgagagctgcc
attggtaggttcggtctaaccggtaaggcacaggtgatgccgatgaagaatctttccgat
ggacagaggagccgtgtgatattcgcgtggttggcttataagcagcctaacatgcttctg
ttggatgagcctactaaccatttggatattgagacgattgactctctagccgaggcgttg
aacgagtgggatggtggtttggttctggtgagtcatgacttcaggttgattaatcaagtg
gctcatgagatatgggtgtgtgagaagcagtgcataactaaatggaatggtgacattatg
gacttcaagaagcatctcaaggctaaagctggacttgaagattga
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