Raphanus sativus (radish): 108862618
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Entry
108862618 CDS
T06014
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108862618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108862618
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108862618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
BTBD8_C
Motif
Other DBs
NCBI-GeneID:
108862618
NCBI-ProteinID:
XP_018492310
UniProt:
A0A6J0P6N6
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Position
5:28324946..28327169
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AA seq
535 aa
AA seq
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MDHSVKTPPVLSVKMWPPSKSTRLMLVDRMTKNITTPSIFSRKYGLLSLQEAEEDAKRIE
DLAFSTANKHFHNEPDSDGTSAVHVYAKESSKLMLEVIKRGPLQVESEAAEANADGDALF
DLSGGRRAFIDVEEARELLSPLSDPNNSFTKIRFSNRSFGSEAASFAVSVLSSVKDQLTE
VDLSDFVAGRPEAEALEVMNMFSSALEGSKLRSLNLSDNALGEKGIRAFGSLIKSQHDLE
ELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGAVAIAEIVKQCPSLEDFRC
SSTRIGSDGGVALAAALASCSRLKKLDLRDNMFGVEGGVALAETLSVLTDLTEIYMSYLN
LEDEGAEALSEALIKSAPCLEVVELAGNDITVKSTGKLAECIASKRALLKLNLSENELKD
EGTILIAEAVEGLDQLVEVDMSTNMMRRAGARALAQSVLKKQSFKLLNINGNFISEEGVD
EVNDMFKDSPDKLGPLDDNDPEGEDFEDEEEEEEGDEGNELEAKLGGLKIKQEEE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcggttaaaacaccacctgttctgtctgtaaagatgtggccacccagcaag
agcaccagactcatgcttgtcgaccgcatgaccaagaacatcaccaccccttccatcttc
tcccgaaagtacggtcttctgagtctccaagaggccgaggaagatgccaagcgcatcgaa
gaccttgctttctccaccgccaacaaacacttccacaacgagcctgattctgacggcacc
tctgctgtccacgtctacgccaaagagtctagcaagctcatgctcgaagtcatcaaacgt
ggtcctctacaggttgaatccgaggccgccgaggccaacgccgatggggacgccttgttt
gatctatccggtggccgtagagctttcatcgatgtagaggaggcacgtgagcttctgagt
cctctctctgatcccaacaactcctttaccaagatccgtttcagcaacaggagtttcggc
tctgaggctgctagtttcgccgtcagcgtcttgtcttccgtcaaggatcagctgaccgaa
gtggatctctccgatttcgtcgcggggagaccagaggccgaagccctcgaagtcatgaat
atgttttcctctgccttggagggttccaagctcaggtctttgaatctttccgacaacgcc
ttgggagagaaaggaatccgagcgttcggctctctcatcaagtcccagcatgacttggag
gagctgtatctcatgaacgatggcatctccgaggatgctgcgagagccgtccgcgagctg
cttccctctactgacaaaatcagggttcttcagtttcataacaacatgacgggagacgaa
ggagcggttgctattgcggagattgtgaagcagtgtccgtctctggaagatttccggtgt
tcgtctacgaggattggttcggatggtggtgttgcgcttgctgcggcgcttgcgtcctgt
agccgcttgaagaaacttgatcttcgcgacaacatgtttggagtcgaaggtggagttgcc
ctggcggagaccttgtcagtgttgactgacttgactgagatctatatgagttacctcaac
ttggaggatgagggagcagaggcactttccgaagctctgattaagtctgctccttgtctt
gaagttgtggagttggctgggaacgatattactgtgaaatccactgggaaattggcggaa
tgcatcgcctcgaaacgggctcttttgaagctgaatttatctgagaatgaactcaaagac
gaagggacaatcttgatcgcagaggcagttgaaggtcttgaccagttggttgaagttgac
atgagcacaaacatgatgagaagagctggggcaagggccttggcacaaagtgttttgaag
aaacagagtttcaagcttctgaacattaatggaaacttcatatctgaggaaggtgttgac
gaggtgaatgacatgtttaaggactccccggacaagcttggtcctctggatgataatgac
cctgaaggagaagattttgaagatgaagaggaagaagaggaaggtgatgaaggcaatgag
ctggaagcaaagctaggaggtctgaaaattaagcaagaggaggaatag
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