Raphanus sativus (radish): 108862627
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Entry
108862627 CDS
T06014
Name
(RefSeq) KH domain-containing protein HEN4 isoform X2
KO
K21444
poly(rC)-binding protein 3/4
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108862627
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108862627
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
108862627
NCBI-ProteinID:
XP_018492319
UniProt:
A0A6J0P6H0
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Position
5:complement(33101529..33107097)
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AA seq
867 aa
AA seq
DB search
MERNSFHYSTEKRSRAVDPGSGFGSSKKAKTHHAHLLSPLVVPVGHASFRLLSAISQVGA
VIGKSGSVIKQLQQSTGAKIRVEEPPAGSPDRVITIIAQVDSTSRVKLGVVDSNGSTEVE
DEVEVSKAQAALIRVFEILAAEAGSSTVVCRLLTESSHAGAVIGKGGQMVGRIRKETGCK
IAIRTENLPVCADSDDEMVEIEGNVNAVKKALVSVSRCLQDCQDVKKIRMVGNRPPLEKE
TNQESSHRPLETIIQDSLLRRSVEDYDYRPRAADMFPRGTLARPSDVIPHEALHLRHVED
RRHIEEDRQDALRRQIEAERQDALRRHIDLGHREVLYRPSDGVRGDVFLQHREVDTSSHE
SLHRPYEMVQRDAIRGIPFESLQRDAIRGIPFESLQRDSFGRTIETIPQETLRRPSSDFL
THRSSTLDTHPHSITTSTLMTKAATLKPHQSEVEAENQDVVFKILCSTENAGGVIGTGGK
VIRTLHSESGALISVGNTIADCEERLITVTASESPERQSSPAQKAILLVFTRLFELATKK
ILDNGSRMSITARLVVPTSQIGCLLGKGGAVVSEMRKATGAAIQILKVEQNPKCTSENDQ
VVQITGEFPNVREAIYHVTSRLRDSLFSNAMKSSVTKSNSTLTTERIHRGQSDNPLSVGS
HQSFGHPPTISTSLHRRTDDSYLSGSQLSINYSRPAVADPYTRPEDPVPDRFNPSAGYSP
NFGRRSAMDHHDISHHLTETASRMWASPPPAALRGLSDASGGLSSARPGPGHGLGSGHKS
AIVTNTTVEIRVPENAMSFVYGEHGNNLEQLRQISGARVIVHEPHLGTSDRIIVISGTPD
QTQAAQNLLHAFILKGETSLSKRYNLN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaacagctttcactattctacagagaagagatccagagcggtagatccgggt
tcaggattcggatcttccaaaaaggcgaagacgcatcacgcgcacctgctctcgcctctg
gttgttcccgtgggacacgcgtcgttccgactgctcagcgcgatatcgcaggtcggcgcg
gtgattggaaaatccggaagcgtgatcaagcagctccagcagtcaacgggagctaagata
cgtgtcgaggagcctccggccgggtctccggatcgggtcatcacgatcatcgcacaggtg
gattcaacctctagggtgaagctaggtgttgttgatagcaacgggagcacagaggtggag
gatgaagtcgaggtttctaaagcacaggcagcgctgattcgtgtcttcgagattctagcg
gctgaagcgggtagcagtacggtggtgtgccgtctgttgacggagtctagccacgccggt
gcggtgataggcaagggtgggcaaatggtggggcgtattaggaaagaaactggttgcaag
attgctataaggactgagaatttgcctgtttgcgctgatagtgatgacgagatggtggag
attgaaggtaatgttaatgctgtgaagaaagctcttgtatctgtctcccgctgcttgcaa
gattgccaagatgttaagaagataaggatggtgggaaacagacccccacttgagaaagag
accaaccaagaatcttctcataggccgttggaaacgattattcaggattctcttcttcgt
aggtcggttgaagattatgattatagaccgagagcagctgacatgtttcctcggggcact
ttagctcgccccagtgatgtgattcctcatgaagctttgcatcttaggcatgtcgaggac
cgcaggcatattgaggaggaccgtcaagatgctttacgcaggcagattgaggcggaacgg
caagatgctttacgtaggcatattgatttgggtcatagagaagtgttatacaggccttct
gatggtgtcaggggagatgtttttctacagcatagagaggtggatacatcttctcatgag
tccttgcatagaccttacgagatggttcaacgtgatgctattaggggcattccgtttgag
tcgcttcaacgtgatgctattaggggcattccgtttgagtcgcttcaacgtgattcgttt
ggaaggactattgaaacaatcccacaagaaactcttcgtcggccaagttcagattttctt
actcatcgtagttccactctagatacacatcctcacagcattacgacctctactctaatg
actaaagctgccaccttgaaaccacaccaatcagaagtggaagcagagaaccaagacgta
gtttttaagatactatgttccactgagaatgctggaggagttattgggacaggaggtaaa
gttataaggacgcttcatagcgagtcaggggccttaataagtgttgggaatacaattgct
gactgtgaagaacgtctaatcacagttactgcatcagagagccctgaacgtcaaagctcg
ccagcccagaaagctattctccttgtttttactagattgtttgagcttgccactaaaaaa
atcctagacaatggctcaaggatgtctataactgcacggcttgtggtcccaacaagtcag
attggttgtttgctgggaaaaggaggtgctgtagtttcggaaatgcggaaagccacaggg
gctgcaattcaaattttgaaggttgagcagaatccaaaatgtacttcagagaatgatcaa
gttgtgcagattacaggagagttccccaatgtaagagaagccatctaccatgttacgagc
aggctgcgagacagtcttttctctaacgcaatgaaaagttccgtaaccaagagcaactcc
accttaactacagagagaatccaccgcggacaatcagataatcccctgtctgttgggtct
catcagtcctttggtcatccacctaccatctctacaagtctgcacagaagaactgatgac
tcctatttaagtgggtctcaattatcaattaactattcgagacctgctgtcgcagatcct
tacacacgaccagaagacccggttcctgataggttcaatccatcagcaggctattctcct
aattttggtcggcggtctgctatggaccaccatgatatctcccatcacttaactgagact
gcatctcgtatgtgggcctccccgccaccggcagctctaagaggcttatctgatgccagt
ggtggattatcttctgcacggcctgggcctggtcacggtcttggcagtggacacaaatct
gccatcgttacaaacacaactgtagaaattagagttccggaaaatgctatgagctttgtg
tatggagagcatggcaacaatctggaacaactgagacagatatcgggtgcgagagtcata
gtccatgaacctcatctaggaacaagtgacaggatcattgtcatatcagggacacctgat
caaacccaggctgctcaaaacctccttcacgcattcattcttaaaggtgaaacctcattg
tccaaaagatacaacctaaactag
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