Raphanus sativus (radish): 108862653
Help
Entry
108862653 CDS
T06014
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108862653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108862653
03009 Ribosome biogenesis [BR:
rsz03009
]
108862653
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108862653
Spliceosome [BR:
rsz03041
]
Complex A
U1 snRNP components
U1 related factors
108862653
Complex B
108862653
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Helicases
108862653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
108862653
NCBI-ProteinID:
XP_018492358
UniProt:
A0A6J0P8I9
LinkDB
All DBs
Position
5:complement(39851852..39855634)
Genome browser
AA seq
647 aa
AA seq
DB search
MAATAPSAVRYAPEDHSLPKPWKGLVDDRTGYLYFWNPETNVTQYERPTSSLPVPAVQVP
QPSSLPNGSSYAPAKDDAKYTRASDGGPRRSRFSEIDDRSGAPYLNGAAANGLGNSAYAA
SAGGLPPSSAPVNDISPGAYCRRHEITVSGGQVPPPLMSFETTGFPPELLREVLSAGFSA
PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFMHLQRIRNDSRMGPTILVLSPTR
ELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRI
SLRQVSYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNP
AQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLT
RNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVINYDFP
NGVEDYVHRIGRTGRAGATGEAFTFFGDQDSKHASDLIKILEGANQRVPPQIRDMAARGG
GGMNKFSRWGPPSGGRGGGSGYGGRGGGSGYGGRGSDSGYGGRGSDSGYGGRGSFGSRDS
GMGSRSSNGWGRDRERSRSPERFNRAPPPSSTGSPPRSFHETMMKHR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgctccttctgcagtccgttatgcacctgaggatcattctcttccaaag
ccatggaagggccttgtcgatgaccgaactggctacttatacttttggaatcctgagact
aacgttactcaatatgagcgacctacttcctctctacccgttcctgccgttcaggttccc
caaccctcttccctacctaatggtagtagctatgctcctgccaaggatgatgctaagtac
actagagccagcgacggtggccctaggcgctccaggtttagtgagattgatgacaggagt
ggagcgccgtatttgaatggtgctgctgccaatggacttggcaactctgcatatgctgcc
tctgcaggaggtcttcctccttcatcagctccagttaatgatatttctcctggggcctat
tgccgccgtcatgaaattactgtcagtgggggccaagtaccaccacctctaatgtccttt
gaaactactggttttcctcctgagcttctgcgtgaggtactcagtgcaggtttctctgct
ccaactccaattcaagctcagtcgtggccaattgcgatgcaaggtagagacattgttgcc
attgctaaaactggctccggaaaaactttgggttacttaattcctggatttatgcatctt
caacgcatccggaatgattcgcgaatgggccctacaatcttggtactgtctccaaccagg
gagctggccacacaaatccaagacgaagctgttaaatttgggaggtcctcaagaatttcg
tgcacctgcttgtacggtggtgcaccgaagggccctcagctaagggatttggaaagagga
gctgatatcgtagttgcaactcctggacgattgaatgacatccttgagatgaggagaatt
agtctgcgtcaagtatcttatcttgtgctagatgaggcggatagaatgttggacatgggt
ttcgaaccgcaaataaggaagattgtgaaagagattcctactaagcgtcaaacccttatg
tacacagctacatggccaaagggagtcaggaagattgcagcggacttgcttgttaaccct
gcccaggtcaacattggtaacgtcgacgagcttgtggctaacaagtcgatcacacagcac
attgaagtggtagcaccaatggagaaacagaggaggttagagcagatattgcggtctcag
gaaccaggctcgaaggtgataatattctgctcaaccaaaaggatgtgcgaccagctaact
cgcaatctgacccgccaatttggagctgctgccatacatggagacaagtcacagcctgag
agagacaatgttcttaatcaattccgcagtggaaggactccggttcttgttgcaactgat
gttgctgctcgtggcttggacgttaaggacatcagggcggtcataaactatgatttcccc
aatggagtggaagactatgttcatagaatcggaagaacaggaagagctggagcgactggt
gaggcattcacatttttcggcgatcaagactcgaaacatgcttcggatctcatcaagatc
ctggaaggagcaaaccagcgagttccccctcagatccgtgatatggctgcacgtggtggt
ggtggaatgaacaaattcagtcgctggggtcctccttccggtggtcgtggtggcggctct
ggttacggtggcagaggtggcggctcgggttatggtggtagaggtagcgattctggttac
ggtggcagaggtagcgactctggttatggtggcagaggtagctttggttcacgtgacagt
ggaatgggaagtagaagcagcaatggatggggaagagatcgtgaaaggagtcgtagcccg
gagagattcaacagagctccaccaccgtcttctactggatctcctcctcgcagcttccat
gaaaccatgatgaaacaccgatga
DBGET
integrated database retrieval system
