KEGG   Raphanus sativus (radish): 108862705
Entry
108862705         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC108862705
  KO
K15361  WD repeat-containing protein 48
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    108862705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108862705
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     108862705
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st RAWUL Beta-prop_DCAF4 Beta-prop_IP5PC_F LMP
Other DBs
NCBI-GeneID: 108862705
NCBI-ProteinID: XP_018492427
UniProt: A0A6J0P8Q0
LinkDB
Position
5:complement(1685777..1690491)
AA seq 754 aa
MHRVASSGSNGGSVRARKEKKLTYVLNDANDTQHCAGVNCLDVLKPSVSTDQTYLFTGSR
DGTLKRWAFDEDDKPFCSATFESHVDWVNDAALAGDTTLVSCSSDTTVKTWDSLSDGVCT
RTLRQHSDYVTCLAVAAQNSNVVASGGLGGEVFIWDIEAALSPVTKASDSTEDSSSNGAN
GSGNSQPVASLRNVGSSNNISVQSSPSHGYAPTVAKGHKESVYALAMNDTGTTLVSGGTE
KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA
VHTDSVWALACTPSFNHVYSGGRDQSLYLTDLGTRESVLLCTKEHPIQQLALQDESIWVA
TTDSSVERWPAEVQSPQKVFQRGGSFLAGNLSFNRARVSLEGLNPPPAYKEPSMTIPGSH
PIVQHEILNNKRQILTKDAADSVKLWNITKGVVVEDYGKVSFEEKKEELFEMVSIPSWFT
VDTRLGCLSVHLETPQCFSAEMYSADLKVSGRPEDDKINLARETLKGLMGHWLAKKKHKP
KPQASTSGDILSAKDTKKNLTASSKSEDISAANDPVYPPFEFPSVSPPSIITEGSQGGPW
RKKITEFTGTEDDKDFPLWCLDAVLNNRLPPRENTKLSFFLHPCEGSNVQVVTLGKLSAP
RILRVHKVTNYVVEKMVLDSPLDSLPLDGGPQPLFAGNGLLPSGSKPWQKLKPSIEILCN
NQVLAPEMSLATVRVYIWKKPEDLILNYRVAIAR
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgcaccgggttgcaagttccgggagtaatggcggttctgtccgcgctcgcaaagagaag
aaacttacctatgtcttaaacgatgccaacgacactcagcactgtgctggcgtaaattgt
ttggatgtgttgaagccctctgtttccactgatcaaacttaccttttcaccggaagtcgt
gatggtactctcaagaggtgggcatttgatgaggacgacaagcccttttgctctgctacc
ttcgagtctcatgttgattgggttaatgacgctgctttggctggtgataccactctcgtt
tcttgttcttcagacactacggtcaagacttgggacagcttatcagatggagtttgtacg
aggactctccgtcaacactctgactatgttacttgtttggcagttgctgcacaaaatagc
aatgttgttgcatctggtggccttggcggggaggtttttatatgggatattgaagccgct
ttatcgcctgttacgaaagctagtgattcaacggaagatagttcctcaaacggtgcaaat
ggtagtggtaactctcagcccgttgcaagtttgagaaatgttggttccagcaacaatatc
tctgtgcagtcatcaccatcccatgggtacgcaccaacagttgccaaagggcacaaggag
tccgtctatgctttggcgatgaatgatacagggacgacgctcgtctctggtggaacagag
aaggttttacgtgtatgggaccctagaactggttcaaaaagtatgaagctgagggggcat
acagataatgtcagagtgctgcttctggactctactggcaggttttgcttgtctgggtcc
tctgattctatgataagactttgggatctaggtcagcagcgatgtcttcatacctatgcg
gtgcatacagattctgtttgggcgcttgcatgcactccatcatttaatcatgtttatagc
ggtggaagagaccaatctttatacttgacagacttgggaacaagagagagcgttttgctg
tgcaccaaggaacatccgattcaacagttagctttgcaagatgaaagtatatgggttgca
acaacggactcctctgtagagagatggccagccgaagtgcagagtcctcagaaggtcttt
caacgaggtggctctttcttggctgggaacttgtcttttaatagggcgagagtttcattg
gaaggactaaatccgccccctgcctacaaggagccgtcaatgactattccaggaagccac
ccgattgtgcagcatgagattctgaataataaaaggcaaatattaaccaaggacgcagct
gactcagtgaaactatggaatataactaagggtgttgtggtagaggactatgggaaggta
tcatttgaagagaagaaagaagaactattcgaaatggtaagcattccatcatggtttact
gtggacacacgacttggatgcttatccgtacatcttgagactccacaatgcttctctgct
gagatgtattcagcagacctcaaagtttccgggcgacctgaagatgataagattaatcta
gcccgtgaaacactgaaaggcctgatgggtcactggctggcaaagaagaagcacaaacca
aaaccccaagcttctacctctggagacattctatccgcaaaagataccaaaaagaatctg
actgcatcgtccaaaagtgaagacatcagtgctgcaaatgacccggtgtatcctcccttt
gagtttccttctgtctctcctccgtccatcatcaccgagggctcccaaggaggtccttgg
aggaagaagataaccgagtttaccggaactgaagatgataaagacttccccttgtggtgc
ctggatgccgtcttgaacaatcgccttccacctagagaaaatacaaaattaagcttcttc
ctgcatccatgtgaaggctcgaatgtgcaggtggtcacactagggaaacttagtgcaccc
cggatcttaagagttcacaaggttaccaattacgttgtggaaaagatggttcttgacagt
ccgttggatagtttacctcttgatggaggaccacagcctctgtttgcaggaaatggactg
ctaccctctggatcaaagccttggcagaaactcaaaccttccattgagatcttatgcaat
aaccaggtcttagctccagagatgagtttggcaactgtgcgggtatatatatggaagaaa
cctgaggatctaatcctcaactacagggtggctatagctagatga

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