Raphanus sativus (radish): 108862707
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Entry
108862707 CDS
T06014
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00541
Biosynthesis of various nucleotide sugars
rsz01100
Metabolic pathways
rsz01250
Biosynthesis of nucleotide sugars
Module
rsz_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
108862707
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
108862707
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
DUF3269
Motif
Other DBs
NCBI-GeneID:
108862707
NCBI-ProteinID:
XP_018492431
UniProt:
A0A6J0P709
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Position
5:5840532..5843352
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AA seq
665 aa
AA seq
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MATYKPKNILITGAAGFIASHVANRLVRTYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK
FVKGDIASADLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMSGKALPIHGDGSNVRSYLYCEDVAEAFEVVLH
KGEVNHVYNIGTTKERRVIDVANDISKLFGINPDNTIQFVENRPFNDQRYFLDDQKLKKL
GWAERTTWEEGLKKTMEWYTANPEWWGDVSGALLPHPRMLMMPGDRLCDGGDERKDADGN
QTFTVVTSTKSGGSGDSKTSLKFLIYGKTGWLGGLLGKLCEKQGIVYEYGKGRLEDRASL
VADIRRVKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENGLLMMNFA
TGCIFEYDAAHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISS
DLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEI
LEMYKSYIEPSFKWSNFTLEEQAKVIVAARSNNEMDGAKLSKEFPELLSIKDSLIKYVFE
PNKRT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctacatataagcccaagaacatcctcatcaccggagcagccggattcatcgcctca
cacgtggccaaccgcctcgtccgcacctaccctgactacaaaatcgtcgtcctcgacaag
ctcgactactgctccaacctcaagaacctcaacccatccaaatcctccccgaacttcaag
ttcgtcaagggagacatcgccagcgccgacctcgtcaactacctcctcatcaccgagaac
atcgacaccatcatgcacttcgccgcccagactcacgtcgacaactccttcggcaactcc
ttcgagttcaccaagaacaacatctacggcactcacgtcctcctcgaggcctgcaaagtc
accggccagatcagaaggtttatccacgtcagcaccgacgaggtttacggagagactgat
gaggatgcttccgttggaaaccatgaagcttctcagctgcttccgacgaatccttattcc
gctactaaggctggtgctgagatgcttgtgatggcctatgggaggtcttacgggttgccg
gttataaccacccgtgggaacaatgtttatggtccgaatcagttccctgagaagttgatt
cctaagtttatactcttggctatgagtgggaaggcgcttccgattcacggagatgggtct
aatgttaggagttatttatactgtgaagatgttgctgaggcctttgaggttgttttgcac
aaaggggaggttaaccatgtttataatatcgggacgacgaaagagaggagagtgattgat
gtggctaatgatatctccaagctctttgggatcaaccctgacaacactattcagtttgtg
gagaaccggccgtttaatgaccagaggtacttccttgatgaccagaagctgaagaagctt
gggtgggctgaacgaaccacttgggaggaagggctgaagaagacgatggagtggtacact
gcgaaccctgagtggtggggtgatgtttctggagctctgcttcctcatccaaggatgctg
atgatgcctggtgatagactctgtgatggcggtgacgagcgcaaggatgcggatgggaat
cagacgttcacggtggttacttccaccaagagtggtggttctggagacagcaaaacgtcg
ttgaagttccttatatacggcaagactgggtggctcggtggtctcctagggaaactctgc
gagaagcaagggattgtgtacgagtatgggaaagggagactagaggacagagcttctctt
gtggcggatattcgcagagtcaaacctactcatgtcttcaatgcagccggtttaacgggc
agaccgaatgtagactggtgtgagtcacacaaaccagagaccatccgagtcaacgtggct
ggtactttgactctggcagatgtttgcagagagaacggtctgttgatgatgaactttgct
accggttgtatatttgagtatgacgctgcacatccagaaggttcagggatcggctttaag
gaagaagacaaaccgaacttcttcggttccttctactcaaaaacaaaggcaatggtggaa
gagcttctaagagaattcgacaacgtatgcaccttgagagtgcggatgccgatctcatcc
gacttgaacaacccacgaaacttcatcaccaagatctctcgttacaacaaagtggtgaac
atcccaaacagcatgaccgtactagacgaactcttaccgatctcgatcgagatggcgaag
aggaacctgagggggatatggaacttcaccaatcctggagtggtgagccacaacgagata
ctagagatgtacaagagctacatcgagccaagtttcaaatggtccaacttcactttggaa
gaacaggctaaggtcattgtcgcggcacggagcaacaacgagatggatggtgctaagctc
agcaaggagtttccagagttgctttccatcaaagactcgttgatcaaatacgtcttcgaa
cccaacaagagaacgtaa
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