Raphanus sativus (radish): 108862708
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Entry
108862708 CDS
T06014
Name
(RefSeq) SUPPRESSOR OF ABI3-5 isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108862708
Spliceosome [BR:
rsz03041
]
Complex A
Other components
Complex A specific factors
108862708
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108862708
NCBI-ProteinID:
XP_018492432
UniProt:
A0A6J0P5Z4
LinkDB
All DBs
Position
5:24462760..24469398
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AA seq
985 aa
AA seq
DB search
MDPGRFGRQQDWDNTSAPEGYGPEHDPNNRFDVSYDRGYRDDVYNYPPGHDMGPLPQSRR
RNSEESYPRELRRQEKPPTETNYDAGYYHDTEVGNRNGYYRDQGHERSSRYDGRDDYSSS
RSRSYHHNRDDSRGKDYDYARRSYDSDYERGSVRDVNRRSGDSQDRERNSRDRERGSRDR
EGDNRSFSRERDVSPHRRYEKSRSGSAGRDGFSRSRSRSPRGRSHGRSYREDSFEGDHWH
GSERRRDYEDRHDQDHFSATPSATVVVKGLSTKSTEEDLYQLLAEWGPLHHVRVIREQSS
GISRGFAFIDFPTVDAARNMMNRVEHDGIIVDGRKLIFRYSTPRPGVPRRQENASRRGYG
GNIVPSDWICTICGCINFARRTSCFQCNEPKTDDSPSADVGLPNSTLGKRSSESGPTHVL
VVRGLDEDADEEMIRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFFSVEDATKALEATN
GTILDKNGKILRVAYAKSVHGSGTGIPASSHASNLAAAAIEAAAFSQQYDGAGWAPKEYN
HDEKQTGGQGQGIGQMASAPQSGYVWDEASGYYYDAASGYYYDGNSGLYYDSNSGVWYSY
DPQAQQYVPCPDQNNESKSTEKQPESTKTEKSNQQKVIISAAATPTVEKAVSLPDAVQAA
AAAAIASEKREKERLKEIKLASKSSILASKKKMSNVLTMWKQRTSETQTQRPSLGGENPP
PTVLAEARSSFSTAQSKGKLTSDTVIAKERSTSNHGVAAMTSTPTTESSSSSKAGAPLMG
VMRGSFGGTSSSANVQVPPVLPSAPSPSVPVSGSGRRRFSEKPTAVPTHRDQPQTSYRDR
AAERRNLYGSSAPSENDVMGSSEDITGLRKGASDPTPFPPGVGVRGITTTEASSFDVITE
EKAIDESNVGNRMLRNMGWQEGSGLGRDGSGMKEPVQAQGVDRRAGLGSHQKKLDPEFEA
QPGDTYRTVLHKKALARFREMSDNN
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtcgatttggtcgtcagcaagattgggataataccagtgctccggagggt
tatggtcctgagcacgatccaaacaaccggtttgacgtatcatatgataggggatatcga
gatgatgtctacaattatccacctggacatgatatgggtcctttgcctcagtctagaagg
cgaaactctgaggaaagttatcctcgtgaacttcgtaggcaagaaaagcctcccacagaa
acaaactatgatgctggttactatcatgacacggaagttgggaatcgtaatggatactac
cgtgatcaaggacacgaaaggtcttcacgatatgatggccgtgatgactactcttccagt
agatctagaagctaccatcataacagagatgatagccgaggaaaagattatgattatgct
cgccggagttatgattctgattatgaaaggggcagtgttagagatgtcaataggaggagc
ggggattcgcaggatagagaacggaactcacgtgatagagagcggggttcacgtgataga
gaaggggacaatagatctttcagccgcgaaagagatgtgagtccacataggagatacgag
aaatctcgatctggatctgctggacgtgatggtttctctagatcaagatcaagatctcca
agaggtaggagccatgggcgaagttaccgggaggacagcttcgagggagatcactggcat
ggaagtgagaggcgaagagactatgaagatagacatgaccaagatcatttttctgctacc
ccatccgccactgttgttgtgaagggtctctcaacgaaatcaacagaagaagatctatac
cagcttctggctgaatggggtcctctgcatcatgtccgtgtgattcgggagcaaagttct
ggaatttctcgtggatttgcatttattgatttccccacagtggatgccgcacgcaacatg
atgaaccgagttgagcatgatggtataattgtggatggaaggaagctgatctttcgttac
agcacaccgaggcctggtgtaccccgtaggcaggaaaatgcttctaggcgcggttatggt
ggcaatatagttccttcagattggatatgcacaatctgtggttgtatcaattttgcgcgg
cgaacctcttgctttcagtgtaatgaaccaaagaccgatgattctccttcagctgacgta
ggtttacccaactcaacattgggaaaacgaagttctgaatcaggtccaactcatgtctta
gttgtacgcgggttggatgaagatgctgacgaggaaatgattcggtatgaattttccaaa
catgctcctatcaaggatcttcgtcttgtcagagacaaattcacgcatgtttcacgagga
tttgcatttgtgcatttcttttcggttgaggatgctaccaaggcacttgaagcaacaaac
ggaacaatccttgacaagaatggtaaaatcctgagagtcgcatatgcaaagagcgttcat
ggttctggaactggtataccagcatcatctcacgccagcaacctcgctgctgcagcaatt
gaagcagcagcattttctcaacagtatgacggtgcgggatgggctccaaaggaatataat
catgatgagaaacaaactggagggcagggccagggcattgggcaaatggcttctgctcca
caatctggctacgtgtgggatgaagcatctggttattactatgatgctgcttctggatat
tactacgatggaaattcaggtctttattatgacagcaatagtggggtttggtactcgtat
gatcctcaagcgcaacaatatgttccttgtcctgatcagaacaatgagagtaaatcaact
gaaaaacaaccagagtctaccaagacggagaaatccaatcagcaaaaagttattatctct
gcagctgctacccccaccgtagaaaaggccgtctccttaccagatgcggttcaggcggct
gcagcagcagcaattgcatcggagaagagagaaaaagaaagactgaaggaaataaaactt
gcatcaaagagcagcatactggctagcaagaaaaaaatgagtaatgttttaacaatgtgg
aagcagcggaccagtgaaacacaaacgcaacgtccctcacttggtggtgaaaatccacca
cctaccgttctggctgaagcaaggtcgtctttctccactgcacaatccaagggcaagctg
acatctgatacagtgattgcaaaggagagatctacctccaatcatggagttgctgcaatg
acatcaactcccactacagaaagctcgagtagcagtaaagcaggagcacctttgatgggg
gtgatgagaggttcgtttggaggaacttcttcctcagctaatgtacaagtgcctccggtt
ttaccttctgctccttccccttcggttccagtttctgggagtgggagaagaaggttctct
gaaaagccgactgcagtgcctactcacagagaccaacctcagacatcatacagggaccgt
gctgcagaaagaagaaacttatatggttcatcagctccaagtgaaaatgatgttatgggt
tcaagtgaagatattacggggttaagaaaaggcgcatcggatccaacacctttccctcct
ggtgtgggcgtacgtgggattacgacgacggaagccagtagtttcgatgtaatcacagaa
gagaaagcaatagacgaaagtaacgtgggaaacagaatgttgaggaacatgggttggcaa
gaaggatcgggtttagggagagacgggagtggaatgaaagaaccagtgcaagcacaaggc
gttgataggagagcaggacttgggagtcatcagaagaaacttgatcctgagtttgaggct
caacctggtgatacctacagaactgttctccataagaaagctcttgctaggtttcgtgaa
atgtctgacaataattga
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