Raphanus sativus (radish): 108862723
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Entry
108862723 CDS
T06014
Name
(RefSeq) PHD finger protein At1g33420
KO
K26271
PHD finger protein MS1/MMD1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108862723
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108862723
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GFIT
Motif
Pfam:
PHD
PHD_2
PHD_5
Motif
Other DBs
NCBI-GeneID:
108862723
NCBI-ProteinID:
XP_018492453
UniProt:
A0A6J0P8S5
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Position
5:complement(19185460..19188055)
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AA seq
705 aa
AA seq
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MAVMDVGRNAKRSRRSNKIPANLYRFSTFPAEEMRCGTSTLQPFRDGVTSFLASHARVTL
PTSTLFSSLRTWQILLRHGDSTDGSDLSSSRLISVDVVEEDVTRSSRSVYCDHCRVVGWS
SHPVCKKRYHFLIRSGGDSKSLNIGLEKACSMCGYTQNLSEGINCRWCSLALDTEDWVYS
QLEDNTHLLHGVIHSNGYAHLLSLKGREGGSGFLTGRSIMDFWDRLCSSLSVRKASVMDV
SRKYGMDYRLLHGVARGCSWYSEWGYELKSGSYALTREAYMSAVTTLSAMPLSEFMFQGR
NPRTQLHSILGFYQSLSCSELVTVRDLFSFLLQLIRENQAKATTTTTSAVLCAWSRSDVE
RVQQTMVKILKAAGGQGAYWVKRWALKRSICKTGSPQLIDYCLKHFGGVLVDDGSRVVCS
RCKPGSNDFEYRLEPVNNVHRLSNQDMNYASEEQIKCDLRYLYDTLLHPQTMVEFRSQAT
SDKMIDAATKILDCKHFIKDYSSSPVNPFAVYLWCHVELSDEANECPSPPPELLVFPLKA
TVSDLKTEVAKAFQEVYAMFKSFEVEELLGYSSMDDSITLKFLIGTNGVMRVKGRCSSKE
GLLQYRMERGVENWEVDCKCGTKDDDGERMLACDLCGVWHHTRCAGIENADALPSKFHCF
RCIELYSKKPKQSVNERGSSQVSLTGFCRGESAAMDSGSMGLIYL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgatggatgtcggtcggaacgccaagagatctaggcgtagcaacaaaatcccc
gctaatctctaccgtttctccaccttcccagcggaagagatgagatgcggcacgtctacc
ttgcagccgttccgcgacggggtgacatccttcctcgcgagccacgcccgtgtcactctc
cctacctccacgctcttctccagcttgagaacttggcagatccttctcagacatggagat
tcgacagacggttcagatctctcctcctcgagactcatctccgttgacgttgttgaggag
gatgtaaccagatcctctagatccgtttactgtgaccactgccgagtcgttggttggagt
agccatcctgtgtgtaaaaagaggtaccacttcctcataagatcaggaggagacagtaag
agcctcaacattgggctggaaaaggcttgctcgatgtgtggttatactcagaacttgtcc
gaaggcattaattgcaggtggtgcagcttggctctggacacagaggactgggtttactct
cagttggaggacaacactcatctacttcatggcgttattcactcgaacggctatgcacat
ctcttgtctctcaagggtagagaaggtggctctggattcttaactggccgttccattatg
gacttttgggacaggctttgctcctccctttctgttcgcaaggctagtgtgatggatgtg
tcaaggaagtatgggatggactaccgattgcttcatggggtggctagagggtgttcttgg
tacagcgagtggggttatgaactcaaatctgggagttatgcactcacaagagaagcgtac
atgagtgctgtgactactttatctgcaatgcctctctctgagttcatgtttcaagggagg
aacccaagaactcaactacactccattctcggcttctaccagtcactctcctgttcagag
cttgtgaccgtaagagacctattctcctttctgctacaactgattcgtgagaaccaagcg
aaagccacaacaactacaacatcggctgtgctttgtgcttggagtagaagtgatgtagaa
cgtgtacagcaaaccatggttaagatattaaaagctgcaggaggtcaaggagcttactgg
gttaaaaggtgggctcttaaaaggtctatttgcaaaacaggctccccacagctgattgat
tattgtctcaagcattttggaggcgtcttggtggatgatggatctcgagtagtctgctct
cgctgcaagcctggctcaaacgactttgagtataggcttgaacctgtcaacaatgtgcac
cgcttatctaatcaagacatgaattatgcatcggaagagcaaatcaaatgcgacttgaga
tatttatatgacacattattgcacccacaaaccatggtcgagttcaggtctcaagctact
agtgataaaatgattgatgcagccacaaagatacttgactgtaagcatttcataaaagat
tattcttccagcccggttaatccctttgcagtctacctttggtgccatgtcgagctttcc
gatgaggccaatgaatgcccatccccaccacctgaactgttggtgtttccactgaaggct
actgtatctgacctgaaaacagaagtggccaaggcttttcaggaagtgtatgcaatgttc
aagagttttgaagtggaggagctcctaggttacagctctatggatgattccattaccctg
aagtttttaattggtacaaatggagtcatgcgggtcaaagggagatgctcatctaaagaa
ggactcctccaataccgcatggagagaggggtggagaactgggaagtcgattgcaagtgt
ggcacaaaggatgatgatggtgagaggatgttggcctgtgatttgtgtggtgtgtggcac
cacactagatgtgcggggattgaaaatgccgatgcactaccttccaagttccattgtttc
agatgcattgaactgtacagcaagaaaccaaagcaatctgttaatgagcgtggttctagt
caagtgtccctaactggcttttgtagaggtgagtcagctgctatggacagtgggtctatg
ggtctaatttatctttaa
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