Raphanus sativus (radish): 108862942
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Entry
108862942 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108862942
00071 Fatty acid degradation
108862942
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108862942
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
108862942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108862942
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108862942
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108862942
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108862942
Exosomal proteins of breast cancer cells
108862942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
108862942
NCBI-ProteinID:
XP_018492715
UniProt:
A0A6J0P7U6
LinkDB
All DBs
Position
5:29122960..29127476
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AA seq
666 aa
AA seq
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MAAAADHVVIVEEGRPATAEHPSAGPVYRCKYAKDGLLALPTDLDSPWQLFSEAVKLYPN
EQMLGRRVTIDSKVGPYTWITYKEAHDAALRIGSAIRSRGVDPGNCCGIYGSNCPEWIIA
MEACMSQGITYVPLYDSLGVNAVEFIINHAEVSLVFVQEKAVSSILACHKGCSSNLKTIV
SFGEVSSTQKEEAENQCVSLFSWHEFLLLGNSDETTLPRKQKTDICTIMYTSGTTGEPKG
VILSNAAIMVEVLSIDKMLQVTDRSCDTSDVFFSYLPLAHCYDQVMEIYFLSRGSSVGYW
RGDIRYLMDDVHALKPTVFCGVPRVYDKLYAGVMQKISAGGLIRKKLFDLAYNYKLGNMR
KGLSQEEASPRLDKLMFDKIKDALGGRAHMLLSGAAPLPRHVEEFLRIIPASNLSQGYGL
TESCGGSFTTLAGVFSMVGTVGVPMPTVEARLVSVPEMGYEAFSGDVARGEICLRGNSMF
SGYHKRQDLTDQVVINGWFHTGDIGEWQEDGSMKIIDRKKNIFKLSQGEYVAVENLENTY
SRCPLIAQIWIYGNSFESFLVAVVVPERKAIEDWAKLNNQSSPNDFESLCQNLKAQKYFL
DELNSTAKQYQLKGFEMLKAVHLEPNLFDIERDLITPTFKLKRPQLLKHYKDIIDQLYTE
AKASRA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagctgctgatcatgtggtgatagtggaagaaggaaggccagccacggcagag
catccatctgcgggaccggtttatcgatgtaaatacgctaaagatggcctcctcgctctt
cctactgatcttgattctccttggcagttatttagcgaggctgtgaagctatatcctaat
gagcaaatgttaggccggcgcgtaacgattgattctaaggtcggtccatacacatggatc
acatataaggaagctcacgatgctgcattgcggattggatcagcaatcagaagccgaggc
gttgatccgggaaactgttgtggaatatacggatctaattgtccagaatggattatcgca
atggaggcctgcatgagccaagggataacttacgtacctctatacgacagtttaggtgta
aacgctgtagagttcatcatcaaccatgccgaggtttcgctagtatttgttcaagagaag
gcagtttcatccatcttagcatgccacaagggatgttcttcgaatttgaagactattgtg
agctttggggaagtctcgagtacacaaaaggaagaagctgagaaccagtgtgtttcttta
ttttcatggcatgagttcttactactgggaaactcggatgagacaacacttcctcgtaag
caaaaaacagacatatgcacaataatgtacacaagcgggacgacgggagagcccaaaggt
gtaatcttaagcaatgcagcgattatggtcgaagttttatccattgataaaatgcttcaa
gtcaccgatcgatcgtgtgacacaagtgatgtgtttttctcgtacttgccattagcacat
tgttatgatcaagtcatggagatctactttttatccagaggctcctctgttggatactgg
cgtggcgacattcggtacttgatggatgatgttcatgcactgaaaccaactgtgttttgt
ggtgttccacgagtttacgacaaactctatgctggtgtaatgcaaaaaatctcagctggt
ggcttgatacgcaagaaactgttcgatttggcttataactataaattggggaatatgaga
aaaggattgtctcaagaagaagcttctcctcgtctggacaaacttatgttcgataagata
aaagatgcattaggaggaagagctcatatgttgttatcaggtgcagcacctttacctcgt
catgtagaggagttcttgagaatcatccctgcctctaatctctctcaaggttatgggttg
actgagagctgtggagggagcttcacgactttagcaggagtattttctatggtggggaca
gtgggtgtgccaatgcctacggtggaggcaaggctagtttctgtgccggagatgggctat
gaagctttttccggggatgtggctagaggagagatttgtcttagaggaaattcaatgttc
tctggttaccacaaaagacaagacctaactgatcaagtcgtgatcaatggatggttccac
acaggagatattggggaatggcaagaagacggatcgatgaagatcatagataggaagaag
aacatcttcaagttgtctcaaggtgaatatgttgctgtcgaaaacctcgagaacacttac
tcaagatgccctctcattgctcagatatggatctatggaaacagcttcgagtcttttctg
gtagcagtggttgtacccgagagaaaggctattgaagattgggctaaacttaataaccaa
tcatctcccaatgattttgaatctctatgtcaaaatctcaaagctcaaaaatacttcttg
gatgagcttaactctaccgcaaagcaataccaacttaaagggtttgaaatgttaaaagcg
gttcatttggaaccaaaccttttcgatattgaaagagatcttataaccccaacattcaag
ttgaaaaggccacagctcctcaaacattacaaggacataattgatcaactttacactgaa
gcaaaggcgtccagagcatag
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