Raphanus sativus (radish): 108862951
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Entry
108862951 CDS
T06014
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
108862951
Domain-containing proteins not elsewhere classified [BR:
rsz04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108862951
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108862951
NCBI-ProteinID:
XP_018492726
UniProt:
A0A6J0P7T8
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All DBs
Position
5:7435202..7438346
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AA seq
608 aa
AA seq
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MTLAETYACIPSTERGRGILISGDSKSDTMLYTNARSVVILDLNNPLNVSIYGEHAYPAT
VARYSPNGEWIASGDVSGTVRIWGARDDHVLKKEFKVLAGRIDDLQWSADGMRIVASGDG
KGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKFK
LSSREHSNFVNCVRYSPDGSKFITVSSDKKGIIYDGKTCEKLGELSSEDGHKGSIYAVSW
SPDGKEVLTVSADKSAKIWEISDSGNGTLKTTLTCPGSSGGVDDMLVGCLWQNDHIVTVS
LGGTISIFSASDLEKSPFQFSGHMKNISSLSVLRGSSDYILSGSYDGLICKWMMGRGFCG
KLQRKQNSQIKCFAAHEEEIITSGFDNTISRISYQDGQVTNEESIGVGNQPNDLSLAPLS
PGLLLVAFESGVVFLRGEKVVSTINLGFTVTALAVTPDGTEAIVGGQDGKLRLYSVNGDS
LAEEAVLEKHRGAISVIRYSPDLSMFASADLNREAVVWDRASREMKLKNMLYHSARINCL
AWSPNSTMVATGSLDTCVIVYEVDRPPSARMTIKGAHLGGVYGLGFADDTHVVSSGEDAC
IRVWSLTT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgccgagacttacgcctgcatcccttcgacggagaggggtcggggaatcctg
atctccggcgactccaagtccgacacgatgctctacacgaacgcccgatccgtcgtgatc
ctcgacctaaacaaccccttgaacgtctccatctacggagagcacgcctacccagccacg
gtggcgcggtactcccctaacggagagtggatcgcgtcgggggacgtgtcggggacggtg
aggatctggggagctcgcgacgatcacgtgctgaagaaggagttcaaggtgttggctggg
aggatcgatgatctgcagtggtcggctgatgggatgcggatcgttgcttctggtgatggc
aaagggaagtctctcgttcgtgccttcatgtgggattcaggatcgaatgtgggggagttt
gatggacactcaaggcgtgttcttagctgcgctttcaagccgaccagacccttccgcatt
gtaacttgcggggaggattttcttgtcaacttctacgaaggccctcctttcaagttcaag
ctctcaagcagagagcattccaactttgtcaactgtgtgaggtattcacctgatggaagc
aagttcattactgtgagttcggataagaagggaatcatatatgatggaaagacttgtgag
aaactgggtgaactttcatctgaagatggacataaaggtagcatctacgctgttagctgg
agtcctgatggcaaagaggtcctcactgtatctgcagacaagtcagctaaaatatgggaa
atctcggattctggtaacggaacattgaagaccacactgacttgtcctggatcatcaggt
ggtgtggacgatatgcttgtcgggtgtctgtggcagaacgaccatattgtcactgtttct
ctaggtggtacaatcagcatattctcagcgagcgatcttgagaaatcccccttccagttt
tcgggacacatgaagaacatctcttccttatctgtgctcagaggaagttctgactacata
ctatccggtagctatgatggtctgatatgtaaatggatgatgggacgtggtttttgcggt
aaattgcagcggaagcaaaactctcagataaagtgctttgctgctcatgaagaagagata
atcacatctggatttgacaatacgatatccaggatctcttatcaagacggccaggtcaca
aacgaagagtctattggcgttggaaaccaaccaaatgatctaagccttgcaccactctcg
cctggtctccttctggtggcctttgagtcaggagttgtgtttctccgcggtgagaaagta
gtgtcaaccatcaaccttgggttcaccgtcactgctttggccgtgacacctgatggaacc
gaagccattgtcggtggtcaagacggtaagctccgtctgtactctgtgaatggcgactct
ctcgctgaggaagcagttctggagaaacacagaggcgccatcagcgtcatacgttactcc
ccagacttatctatgtttgcatcagctgatttgaacagagaagctgttgtatgggacaga
gcctccagagagatgaaactgaagaacatgttgtaccatagcgctcgcataaactgccta
gcttggtctccaaacagcactatggttgccacgggatcattagacacgtgtgtgattgtg
tatgaagtggacagacctccttccgcacggatgaccataaaaggagcgcatctaggtgga
gtttatggtctgggtttcgctgatgatacccatgttgtgagttctggtgaagatgcttgt
atccgggtttggagcttaacgacatga
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