Raphanus sativus (radish): 108862970
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Entry
108862970 CDS
T06014
Name
(RefSeq) probable DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108862970
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108862970
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108862970
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108862970
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108862970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
AAA_5
Mg_chelatase
AAA_3
Sigma54_activat
AAA_16
AAA
cobW
DUF4423
AAA_29
Motif
Other DBs
NCBI-GeneID:
108862970
NCBI-ProteinID:
XP_056842322
UniProt:
A0A9W3BSR6
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All DBs
Position
5:complement(3352513..3357611)
Genome browser
AA seq
801 aa
AA seq
DB search
MGIYGDGSGDGASMTSRRRGSIGVDSIDIAKILAVYFRDNENSCIDEEKLMLTAELIRIF
SSPSGRDLVSQQVNEDGGGSFSLPLDLQQFKKLCDIENFFLNLEDNPKGVIPCMNAAVHK
VLLGQWETNGFDDVMKINIRLHNYPESSISLKNLRAAYIGKLVTVHGTVVKVSTVKPLVT
QMAFDCAKCKTSITREFNDGKFSPPQNCDTHGCKSKMFTPVRSSAQTIDFQKIRVQELQK
PEDHEEGRVPRTVECELMEDLVDTCIPGDVVTVTGIIGVINNYMDIGGGKSKSKNQGFYY
LFIEAVSVKNSKKQSAFENSEDSRSGVQSADVGELYSFSQRDLEFIVKFNEEYGSDTFRR
ILHSVCPSIYGHEIVKAGITLSLFGGVRKHSMDRNKVPVRGDIHVIIVGDPGLGKSQLLQ
AASAISPRGIYVCGNATTKAGLTVAVVKDSMTNDFAFEAGAMVLADGGVCCIDEFDKMTN
EHQALLEAMEQQCVSVAKAGLVASLSARTSVIAAANPVGGHYNRAKTVNENLKMSAALLS
RFDLVFILLDKPDELLDKQVSEHIMSLHSGGAEASPALKKFKTASGSANMHVKEGSLLSR
LRLDPKKDDDFTPIPGQLLRKYVAYARTFVNPKMSKAAGEIIQKFYLKLRDHNTSADSTP
ITARQLESLVRLAQARARVDLREDITVQDAMDVVEIMKESLYDKFVDEHGVVDFGRSGGM
SQQKEARRFLSALDKQSELQQKDCYSVSEMYSLADRIGLRVPDIDTFLENLNTAGYLLKK
GPKTYQVLSSSYSRSQSSRSR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggtatatacggagacggaagcggcgacggggcgagcatgacgtcgagacgccgtgga
tcgatcggcgttgattccatcgatatcgcgaagatattagctgtgtatttcagagacaac
gagaactcgtgcatcgatgaggagaagctgatgctcacggcggagcttatccggatattc
tcctcgccgagtggtagagacttagtttctcagcaggtgaatgaagatggtggtggttct
ttctctttgccgcttgatcttcaacaattcaagaagctatgcgatatcgagaattttttc
ttaaatttggaggataatcccaaaggagttatcccatgtatgaatgctgctgttcacaag
gttcttttaggtcaatgggaaactaatggctttgatgatgttatgaagatcaatattcgt
cttcataattatcctgaatcttcaatctcgctgaaaaacctgagagcagcatatattggt
aagcttgtaacagttcatgggaccgttgttaaagttagtactgtgaagcctcttgtcaca
cagatggcttttgactgtgcaaagtgtaaaactagcataacccgggaatttaatgatgga
aagttttcacctccacaaaattgtgacacccatggttgcaagtccaaaatgtttactcca
gtccgatcctccgctcagaccattgattttcagaagataagggtccaggagttgcaaaag
cctgaagatcatgaagaaggacgtgtaccccgaactgtggaatgtgagctgatggaagac
cttgtggacacatgtatccctggtgatgtggtgactgttacagggattataggagtaatt
aacaattacatggatattgggggagggaaatcgaagtccaagaatcaaggattctactac
ttgtttatagaggcagtttcagttaaaaattcgaagaagcagtctgcatttgagaactcg
gaagactccagaagcggtgtccagtctgcagatgttggtgaattatattcattctcgcag
agagatttggaatttattgtgaagttcaacgaagaatatggttctgatacatttcgtcgc
atacttcattcagtttgcccatctatctatgggcatgaaattgtcaaagctgggataact
ctatccctgtttggaggtgtaaggaagcattctatggatcggaacaaagttccagtgaga
ggagacattcatgtcataattgttggtgaccctggattgggaaaaagtcagctcttgcaa
gcagcatcggccatctctcctcgtggcatctatgtatgtggtaatgcgacgactaaagca
gggctcaccgttgctgtagtgaaagattccatgacaaatgactttgcgtttgaggctggt
gccatggtacttgcagatggcggggtttgctgcattgacgagttcgataaaatgaccaac
gagcatcaggctttgctcgaagcaatggaacaacaatgtgtctctgttgcaaaggctgga
cttgtggctagtctttcagctcggacttctgttatagcagcagcaaatcctgttggtggc
cactacaaccgtgcaaaaactgtaaacgagaacttaaaaatgagtgctgcccttctctca
cggtttgatttagtattcatattacttgacaaacctgatgagctactcgacaagcaagtc
tccgagcacattatgtcgcttcattctggaggtgcagaagcatcacctgcattaaagaag
tttaagacagcatcaggatctgcaaatatgcatgtgaaagagggttctctactctcaaga
ctgcggttagaccctaagaaagacgatgacttcactcccattcctggccaactgcttagg
aaatatgttgcttatgcaaggactttcgtcaaccctaagatgtcgaaggcagctggagag
ataattcaaaagttttacttgaagctgagagaccataacacttccgctgatagcacacca
ataacagcaagacaactggaaagtttggtcaggcttgcgcaagctagagctcgggttgac
ttaagggaagatataacagtccaggacgcaatggatgtggttgaaatcatgaaagaatct
ttgtatgataagttcgtagatgaacatggggttgtggattttggtcggagtggaggaatg
agtcaacaaaaggaggcaagacgcttcttaagtgctcttgataagcaatcagagttgcag
caaaaagattgttactctgtttcggagatgtatagtttagctgataggatcgggctacga
gttccagacatcgatacattcctagagaacctgaatactgccggctacttgctcaagaaa
gggccaaaaacttaccaggtcctctcctcatcttattcccggagtcagtcatccaggtca
agatga
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