Raphanus sativus (radish): 108863021
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Entry
108863021 CDS
T06014
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108863021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108863021
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108863021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
108863021
NCBI-ProteinID:
XP_018492811
UniProt:
A0A6J0P819
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Position
5:complement(38523913..38526836)
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AA seq
496 aa
AA seq
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MQSDSGKLFIGGISWDTDEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPSVA
ETVIIQKHNIDGRLVEAKKAVPRDDQNTVTRSSSSLQGSPGGGRTRKIFVGGLPSSVTES
DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAIEKVLLKTFHELNGKMVEVKR
AVPKELSSPSPARSSPLGGAGYGYGGVGRVNNLLLNGYAQGFSPGAVGGFGLRMMDGRFS
SSPIGAGRSGFASYNGGSGYGMNVNFEQGLPTGFNGGNVDYGRGMSPYYIGNANRFGPAV
GYEGGNGGGGGGGNSSFFSSNLWGNNGGRNYNNNATNSNMGGGGSTSGNNTLNGPFGSSG
VVNWGAPGGNNGVSNENVKFGYGGNGESGFGLGGVRNIGPPSKAAAAPSSSFSSNNAGYE
AGGLAEFYGNGAVYSDPTWRSSPPETEGPASFSYGIGGGGGGGGGPSSDVSARSSSPGYV
GSYSVNKRQPNRGIAT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagacagtgggaagcttttcatcggagggatatcgtgggacaccgatgaggag
cgtctcaaggagtatttcagcagcttcggtgaagtcatcgaagctgtgatcttgaaagac
cgtaccaccggtcgtgcacgtggcttcggcttcgttgtctttgctgatccttccgttgca
gaaactgttataatccaaaaacataacattgatggcagattggttgaagccaagaaggct
gttcctagagacgaccaaaacacagtaaccagaagcagcagtagcctccaaggatcacca
ggaggtggtcggacgaggaagatattcgttggagggttaccttcttccgttacggagagc
gacttcaagacgtattttgagcagttcgggacgactacggacgtggttgttatgtacgac
cacaacacgcagaggcctagaggtttcggattcattacttatgactccgaggaggccatt
gagaaagtgctgctcaagacgttccatgagctcaacggtaaaatggttgaggttaagcgg
gctgttcctaaggagttgtcatctccgagtccagctcgcagtagcccgctcggtggtgct
ggctacggctatggaggagtaggtagagtcaacaacctcctacttaatgggtatgctcaa
gggtttagccccggtgcggttggagggtttgggcttaggatgatggatggtaggtttagt
agtagtcccattggtgctggaagaagcgggtttgcgagttacaacggagggtctggatat
gggatgaatgtgaactttgagcagggtttgcccacagggttcaatggaggaaacgtagac
tatgggagagggatgagcccttactacattggtaacgcgaaccggtttggtcctgcggtt
ggttatgaaggaggcaatggaggaggaggaggaggagggaactcatctttcttcagttcg
aatctttggggaaacaatgggggtcgtaactataataacaacgctacaaactcaaacatg
ggaggaggaggatcaacaagtgggaacaacacacttaacggtccgtttgggagttcaggg
gttgttaactggggtgctcctggaggaaacaatggtgttagtaacgagaatgtgaagttt
ggttatggaggaaacggtgaatctggttttggattgggaggagtaagaaacattgggcct
cctagcaaggcagcagcagcaccatcatcttcattctcttctaacaatgcgggttatgaa
gcaggaggacttgcagagttttatgggaatggtgcagtctatagtgatcccacatggaga
tcatcacctcctgagacagaaggtcctgcttcttttagctatgggattggaggtggagga
ggaggaggaggaggtccttcttcggatgtttcagctagaagttcatctccaggttatgtt
ggtagttacagtgtgaacaagagacaaccaaacagaggaattgctacttag
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