Raphanus sativus (radish): 108863050
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Entry
108863050 CDS
T06014
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04016
MAPK signaling pathway - plant
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108863050
04075 Plant hormone signal transduction
108863050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108863050
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108863050
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
Troponin
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
108863050
NCBI-ProteinID:
XP_018492851
UniProt:
A0A6J0P854
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Position
5:complement(18941824..18944007)
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AA seq
613 aa
AA seq
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MTEPTMNLWTTDDNASMMEAFMSSSSDISALWPPATTTTATASTTAPAPAGFNEESLQQR
LQALIEGTNEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKGKPRQRSTPPPFSTPAD
QKYRKKVLRELNSLISGGGGPTTDDAVDEEVTDTEWFFLVSMTQSFACGSGLAGKAFATG
NAVWVSGPDQLTGSGCERAKQGGVFGMQTIACVPSANGVVELGSTEQIRQSSDLMNKVRV
LFNFNGGGAGDLSGLNWNLDPDQGENDPSMWINDPIGVPEQGNGAPSSSSQLFAKSIQFE
HGGSSSTITENPNPDPTPSPVHSQIQNPKLSNNNFSRELNFSTSSTTLVKPRAGEILSFG
DEGKRSSVNPDPSSYSGQTQFENKRKKSIGQSDHDKVLTFGTGGGESDHSDLEASVVKEI
PEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI
AYINELKAKVTKTESERTQIKTQLEEVKMELAGRKASAGGDLSSSCSMTAIKPVGMEIEV
KIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYT
QEQLRASLISKIG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacggagccgacgatgaatctctggaccaccgacgataacgcctctatgatggaagct
ttcatgagctcctcctccgacatctcagccttatggccaccggcaacaacaacaacggca
acggcgtcgactacagctccggcaccggcgggatttaacgaggagagtctccagcaaagg
ctacaagcactgattgaagggactaacgaaggctggacctacgctatattctggcagcct
tcgtacgacttctccggcgcctccgtgctcggatggggcgatggttattacaaaggagaa
gaggacaagggaaagccccgacagaggtcgactccgccgccgttttcgactccggcggat
cagaagtaccgcaagaaggtgttgcgtgagctcaactcgttgatctccggcggaggtggt
ccgacgacggatgacgccgttgacgaagaggtgacggacacggagtggtttttcttggtt
tcgatgacgcagagcttcgcttgcggttctggactagcgggcaaggcgttcgcgacgggt
aacgcggtttgggtttcgggtccggatcagttaaccgggtcgggttgtgagcgggccaag
caaggaggagtctttgggatgcagaccatcgcgtgtgttccttcggcgaacggggttgtt
gaactcgggtcaacggagcagatccgacagagttcggatcttatgaacaaggtccgagtg
cttttcaatttcaacggtggcggcgcgggagatttatcgggtctgaactggaatcttgac
ccggatcaaggcgagaacgatccgtctatgtggattaatgacccgattggagtacccgag
cagggtaacggagctccgagctctagctcccagcttttcgccaagtcgattcagtttgag
cacggtggtagttcaagcaccataaccgaaaacccgaacccggatccaactccgagcccg
gttcattcccagatccagaatccgaaactcagtaacaataatttctcccgagagttgaat
ttctcgacgtccagtaccaccttggtgaaaccaagagccggggagatattgagtttcggc
gatgagggtaaacggagctccgtgaacccggatccgagctcttactcgggtcagactcag
ttcgagaataagagaaagaagtcaataggtcagagcgatcatgacaaggttctaactttc
ggaaccggcggaggagaatccgaccactccgatctagaagcctccgtcgtgaaagagata
ccggagaaacgtcccaagaaacgcgggagaaaaccggccaacggtagagaagagccgctt
aaccacgtcgaagcggagagacagagacgcgagaaactaaaccagcggttctacgcgctg
cgtgcggtcgtaccaaacgtctcgaaaatggacaaagcttctttgctcggagacgcgatc
gcttacatcaacgagcttaaggcgaaggtgaccaagacggagtctgagagaactcagatc
aaaacccagctcgaggaagtgaaaatggagctcgccggaagaaaagccagcgccggcggt
gatctgtcgtcgtcttgctcgatgacggcgatcaaaccggtcgggatggagatcgaggtg
aagatcatcggctgggatgcgatgataagggtggaatcgagcaagaggaatcatccggca
gcgaggttgatgtcggcgttgatggatctagagcttgaggtgaatcacgcgagtatgtcg
gtggttaacgatctgatgatacagcaagcgacggtgaagatgggattcagaatttacacg
caggagcagctccgggcgagtttaatctcaaagatcggttaa
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