Raphanus sativus (radish): 108863081
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Entry
108863081 CDS
T06014
Name
(RefSeq) ubiquitin domain-containing protein DSK2b isoform X1
KO
K04523
ubiquilin
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108863081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108863081
03051 Proteasome [BR:
rsz03051
]
108863081
Membrane trafficking [BR:
rsz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108863081
Proteasome [BR:
rsz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108863081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Mod_r
TBK1_ULD
Dsc3_N
CUE
Ubiquitin_5
UBA_HOIP
UN_NPL4
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
108863081
NCBI-ProteinID:
XP_018492890
UniProt:
A0A6J0P8B8
LinkDB
All DBs
Position
5:complement(31934291..31937680)
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AA seq
556 aa
AA seq
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MGGEGGDSSKPQAAAGEGGDVVAVNVRCSNGSKFSVSTSLDSTVEAFKELVAQKSEVPAN
QQRLIYKGRILKDDQSLLSYGLQADHTVHMVRGSAPSSSPPPAPTPATTQTTAPGVTRGV
GSNDSSIPGLGFNPLGGGGNPMSGLFGAGLPDLEQAQQQLAQNPNMIRDMMNTPAIQSLM
NNPEFMRSMIMSNPQMRELVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAM
SNIESMPEGFNHLRRMYENVQEPLMNATTMPGNAGSDTASNPFAALLGNQGVTTDAASNN
STTPNAAETGTGNGIPNANPLPNPWGATAGQTNAPGNTNSGGDARSPGLGGLGGLGGLGG
LGGLGGLGMLGGDSPLGATPDASQLSQILQNPAMSQMMQSVLSNPQYMNQLMNLNPQLRT
MLDSNPQLREMMQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTTQDPGQTGAAATGAG
NNAGLDLLMSMFGSLGTGGLSGTNQPNVPPEERFATQLQQLQEMGFYDRAENIRALLATN
GNVNAAVERLLGSIGQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaggaggagactcgagtaagccgcaggctgctgctggcgaaggaggagat
gtggtggccgtgaacgtcaggtgctcgaatggatccaaattcagcgtgagcacgagtctc
gattccacggtggaggctttcaaagagctggtggctcagaagagcgaagtgccagcgaat
cagcagcgtctgatttacaagggtcggatcctcaaggacgaccagtctctcctcagctat
ggtttgcaggctgatcacaccgttcatatggttcgaggctctgcgccttcttcatcacct
cctcctgctcctactccggctacaacccaaaccactgcacctggtgttactcgaggggtt
ggttcaaacgacagctcgattcccgggcttggatttaatcctctgggtggtggtgggaat
cccatgtctgggctattcggagctggtcttccggatcttgagcaggcacagcaacagcta
gctcagaaccctaacatgattagagatatgatgaacacgccagccattcagagtctaatg
aacaaccctgagttcatgaggagtatgatcatgagcaaccctcagatgcgtgagcttgtt
gatcgaaaccctgagcttggtcacgtcctcaatgaccccagcatccttcggcagaccttg
gaagcggcgaggaaccctgagctgatgcgtgagatgatgaggaatactgatagggccatg
agtaatattgagtctatgcctgaggggtttaaccatcttaggcgtatgtatgagaatgtc
caggaaccgctcatgaatgccactacaatgcctgggaacgctggaagcgatacggcttct
aatccttttgctgctctccttggaaaccagggtgttactaccgatgctgcttctaataat
tccacgacaccgaatgctgctgaaacggggactggaaatggtattccgaacgcaaatcca
cttcccaatccttggggtgctacagctggccagacgaatgcccctggaaatacaaattct
ggtggggatgcgagaagccctggacttggtggacttggtggtcttggaggtcttggtgga
cttggtgggcttggtggactcggtatgcttggaggggattcacctcttggtgccactcca
gatgcttctcagttgagccagatattgcaaaatccagccatgtcccagatgatgcaaagc
gtcctttccaatccacaatacatgaaccagcttatgaatctcaacccacaactgcgaacc
atgctagattccaatcctcagttgagggaaatgatgcagaacccagatttccttcgccag
tttagctccccagagatgatgcagcaaatgatgactctacagcaatcactgttctctcag
aataggaatacgaccacccaggatccggggcaaactggtgctgctgcaacaggggcaggc
aataacgcagggctggatttattgatgagtatgtttggcagtcttggtactggcggcctg
agtggcacgaaccaacccaatgttcctcctgaagaacgcttcgcgactcagttgcaacag
ctgcaagaaatgggattctatgacagagcagagaacataagggctttgcttgcaaccaat
gggaacgttaacgctgctgtagaacgactcttggggagtattggccagtag
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