Raphanus sativus (radish): 108863104
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Entry
108863104 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: probable inactive E3 ubiquitin-protein ligase SINAT6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108863104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108863104
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108863104
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108863104
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Zn_ribbon_PaaD
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
108863104
NCBI-ProteinID:
XP_018492919
UniProt:
A0A6J0P8B1
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All DBs
Position
5:37361967..37363065
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AA seq
235 aa
AA seq
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MYVVIVHTYVTYIHTPFSSFHFHHLPRDSCEMEPPIDDLQIECQVHELLDFPCSIDHHTR
EVITDKEKPYNCPYCGSKCTVTGDIQCLLEHLRNDHHVEMHDGRCFSHRYVHHNPTKHHH
HATRMLTLLDCYGRQFCLYFEAFHLXKTPMYIAFMQFMGDEEEATSFSYTLEVNGNGRKM
TWQGVPRSIRDSHKTVRDSQDGLIITRKLALFFSADNTNSKQLKLKISGRVWREH
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtggttattgtacatacatacgtaacatacattcatacacctttctcctctttt
cactttcatcacttgcctcgtgattcatgcgaaatggaacctccaatcgatgaccttcag
attgaatgtcaggtccatgagttgctcgatttcccgtgttccattgaccaccatacaaga
gaggtcatcactgataaggaaaaaccgtataattgtccctactgtggatccaagtgtaca
gtcacaggagatattcaatgtctgcttgagcatctaaggaatgatcatcatgttgaaatg
catgatgggcggtgtttcagtcatcgatatgtccatcataatcctactaaacatcatcat
catgctactcggatgttaactcttctggattgttacggtcgacaattctgcttatacttt
gaagcattccacctanagaagacgcccatgtacatagctttcatgcagtttatgggagac
gaagaggaagcgacgagcttcagctacactttggaggtcaatggcaatggcaggaagatg
acatggcaaggagtgcctagaagcattcgtgacagtcacaaaaccgtccgtgacagccaa
gacggcttgatcatcactcgcaagttggctttgttcttctctgccgacaatacaaacagc
aagcaactaaagttgaagatttcaggtcgtgtatggagagaacattga
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