Raphanus sativus (radish): 108863114
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Entry
108863114 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108863114
00071 Fatty acid degradation
108863114
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108863114
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
108863114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108863114
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108863114
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108863114
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108863114
Exosomal proteins of breast cancer cells
108863114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
108863114
NCBI-ProteinID:
XP_056842359
UniProt:
A0A9W3BSS2
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All DBs
Position
5:38970987..38976120
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AA seq
687 aa
AA seq
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MDTSSSAARRRINAIHSHLVTSSRSSPLLCSNPTAGEFCLDNGYSVVLPEKLSTGNWNVY
RSARSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGEV
GTARTALGSGLVHHGITSGSSVGIYFINRPEWLIVDQACASYSYVSVPLYDTLGPDAVKF
IVNHANVQAIFCVPETLNSLLSGLSEMPTVRLVVVVGGLNESLPSLPPSAGVKVVSYSVL
LNQGRSNPQPFCPPKPDDVATLCYTSGTTGTPKGVVLTHANLIANVAGTSFSVKFFSSDI
YISYLPLAHIYERANQILAVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRIYD
GITNAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRFMTSG
ASPLSPEVLEFLKICFGGRVSEGYGMTETSCVISGMDEGDNLTGHVGSPNPACEVKLVDV
PEMNYTSADEPHPRGEICVRGPIIFRGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLK
IIDRKKNIFKLAQGEYIAPEKIENVYAKCRFVGQCFIYGDSFNSSLVAVVSVDPDVLKSW
AASEGIKGDLRELCNNPRVKAAVLSDMDAVAREAQLRGFEFAKAVTLVLEPFTLENGLLT
PTFKIKRPQAKEYFAEAITNMYKELAK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcttcctccgccgcacgccgccgcataaacgctatccactcccatctcgtc
acctcctctcgctcctcccctctcctctgctccaatcccaccgccggcgagttctgtctc
gataatggctatagcgtcgtgcttccggagaagctgagcactggcaactggaacgtctac
agatctgctcgatctccgttcaagctcgttagcaggttccctgatcatcctgacatcgcc
actctccatgacaactttgagcatgctgttcatgactttcgggattacaagtacttaggt
actcgcgttcgtgttgacggaaccgttggagactacaaatggatgacttatggagaagtt
ggtacagcaagaactgctttaggttctggtttagttcatcacggaatcacctcgggatct
tctgttggaatttactttatcaaccgcccagagtggctcattgttgatcaagcttgtgct
tcttattcttatgtctctgttcctttgtatgatactcttggtcctgatgctgtaaaattt
attgtcaatcatgcaaatgtgcaagccatattttgtgtgccagagacgttaaactcctta
cttagcggcttgtctgagatgccaactgtacgcctggtggtggttgttggagggttaaat
gaatctttgccttcgcttcccccatccgcaggagttaaagttgtatcatattcggtgtta
ctgaaccagggccgtagtaacccacagccgttttgtccaccaaaaccggatgatgttgca
accttatgctatacaagcggaacaactgggaccccaaagggagttgtattgactcatgca
aacttgattgcaaatgttgctggaacaagttttagtgtgaaatttttctcttcagatatt
tacatttcatatcttccgctggcacacatttacgaacgagcaaatcagatcctagcagtg
tactttggagttgctgttggtttctaccaaggggacaatatgaaactactggatgatttg
gctgctctgagacctactgtattcagcagcgtcccccgattatacaatagaatatatgat
ggtattactaatgcagtaaaaacctcgggtgggctgaaagagaggctcttcaatgctgcc
tataatgcaaagaagcaggctctcttgaatggaaaaagtgcgtctcccatatgggacagg
ttggtatttaataagataaaagacagacttggaggacgggttcgttttatgacgtctggg
gcttcacctctgtctcctgaagtgttggagtttttgaagatatgctttggaggaagggta
tcagagggatatggaatgacagaaacatcttgtgttataagtggcatggacgagggtgat
aacctcactggacatgttggctctcctaatccagcttgtgaagtaaagcttgtggatgtc
ccggaaatgaactatacatcagcagatgagccccatcctcgtggcgagatatgtgttagg
ggtcccatcatcttcagaggctattacaaggatgaagttcaaacgagagaggtaattgat
gaagatggatggcttcacactggagatataggtctttggctaccgggaggacgtctaaaa
atcattgacaggaaaaagaacatcttcaaattggcgcaaggggagtatatagctccagag
aaaattgaaaacgtttatgccaaatgcagatttgtcggccaatgcttcatatatggtgat
agctttaattcatcattggtggctgttgtatcggttgatccagatgtgcttaaaagctgg
gctgcttcagaaggcataaagggagatctgagagagctgtgcaataacccgagagtgaaa
gcagcagtactatcagacatggacgctgttgcgagagaagctcagttgagaggctttgag
tttgcaaaagctgtaacactggtgctggagccatttacgctagaaaatggcttgttgaca
ccaacattcaagattaagagaccacaagcaaaggaatacttcgccgaagcaataacaaac
atgtacaaggagcttgctaaataa
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