Raphanus sativus (radish): 108863194
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Entry
108863194 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108863194
KO
K14841
ribosome biogenesis protein NSA1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108863194
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108863194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108863194
NCBI-ProteinID:
XP_018493036
UniProt:
A0A6J0P8N5
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All DBs
Position
1:12664484..12666932
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AA seq
438 aa
AA seq
DB search
MPRVISNETLGCPPIRALTFDSLGLIKVTEARGKERGTPTVVNTWGEMNASRSVLAASMD
DRLTNPLLAVARKDGNVEVLNPCNNDLHFAYSVFGDDGSSPEDNEISGLHLFRKQKEDQT
ERSCTLLTCTRKGDVSLRTVQFPDARADSKDDAAPKTWKACGSGELLVGKVDGTENFGLF
GGKRVEVNIWDLEQCTKIWSAKSPPKDNLGIFTPTWFTCAAFMSNDDHRKFVTGTKSHQV
RLYDVSAQRRPVLSFDFHETAITAITEDPDGHTVYVGNASADLAAFDIRTGKLLGSFLGK
CSGSIRSVVRHPHHQVIASCGLDRYLRIYDVKTRQLISAVFLKQHLTGLVFDSGFSGEEI
AVANTEVDAETEETMKQEGDEEENEDETEEAPVKKKKSKKEKRNREKVSEGEEVDEVRSK
KTRDHKKKTKKVKHTQQD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtcatctccaacgagaccctcggctgccctccgatccgtgctttaaccttt
gattctctcgggcttatcaaagtgactgaagctcgaggtaaagagagaggaactcccact
gtagtcaacacatggggcgagatgaatgcttccagaagcgttctcgccgcttccatggat
gaccgtctaaccaacccgcttttggctgtggcaagaaaagatggcaacgttgaggttctt
aatccttgtaataatgatcttcactttgcatactctgtgtttggtgacgacggttcttcg
cctgaagataacgaaatctccggcctgcacttgtttagaaagcaaaaagaagatcaaaca
gaaagatcttgcacattgcttacatgcacgagaaagggagatgtgagcctcagaacggtt
cagtttccagatgcgcgtgctgattctaaggatgacgctgcgcccaaaacttggaaagca
tgtggttctggtgagctattggttggtaaggttgacgggaccgagaacttcggcttgttt
ggaggcaaacgtgttgaagtcaatatatgggatcttgaacaatgtaccaagatctggagc
gcaaaatctcctcctaaagacaatctagggatcttcacgcctacctggttcacttgtgct
gcattcatgagcaacgacgatcaccgtaaatttgtcactggaactaagtctcaccaggtt
cgtctttatgatgtttctgctcaacgtagaccggtcctgtcctttgatttccacgagact
gctattacagctatcactgaagacccagatggtcatactgtctatgttgggaatgcttct
gctgacctcgctgcctttgatatacgaacaggaaagctgttgggaagctttttaggaaag
tgttccggaagcataagatctgttgttagacatccacatcatcaagtgatagcttcttgc
gggttagacagatatttacggatttatgacgtgaagacacgacagctcatctctgcggtt
ttcttgaagcagcatcttacaggtctcgtcttcgactcaggctttagtggagaagagata
gctgtcgcaaacacagaggttgacgctgaaacagaagagacaatgaagcaggaaggtgat
gaggaagagaatgaagatgaaacagaggaggctcctgtgaagaaaaagaagtcaaagaaa
gagaaacgcaacagagaaaaagtctccgagggtgaagaggtagacgaggtaagaagcaag
aagacacgagaccacaagaagaaaaccaagaaagtaaaacatactcaacaagactag
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