Raphanus sativus (radish): 108863202
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Entry
108863202 CDS
T06014
Name
(RefSeq) eukaryotic initiation factor 4A-1
KO
K03257
translation initiation factor 4A
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108863202
03012 Translation factors [BR:
rsz03012
]
108863202
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108863202
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108863202
mRNA cycle factors
Stress granule specific factors
108863202
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
eIF-4
108863202
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108863202
Exosomal proteins of bladder cancer cells
108863202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF8050
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
108863202
NCBI-ProteinID:
XP_018493044
UniProt:
A0A6J0P8P3
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All DBs
Position
5:30470436..30472670
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AA seq
412 aa
AA seq
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MAGSAPEGTQFDTRQFDQRLNEVLEGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLVQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRVLQAGVHVVVGTPGRVFDMLRRQSLRSD
SIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatcagcacctgaaggcacacagttcgatactcgtcagtttgaccagaggctc
aatgaagtccttgagggacaggatgagttcttcacctcctatgatgaggtccatgagagc
tttgatgccatgggtttgcaagagaaccttcttaggggtatctacgcctatggttttgaa
aagccttctgctattcagcaaagaggaatcgtacccttttgcaagggtcttgacgtgatc
cagcaggctcagtctggtactggcaaaaccgccaccttctgctctggcgtcttgcagcag
cttgacttctcccttgtccagtgccaggctctcgtcttggctcccaccagagagcttgct
cagcagattgagaaggtcatgcgtgctctcggagattaccttggcgtcaaggtccacgcc
tgtgtcggtggaaccagtgttcgtgaggatcagcgcgttctccaggccggtgttcacgtt
gtcgttggaactccaggtcgtgtctttgacatgctcagaagacagtcacttcgctctgac
agcatcaagatgtttgtcctcgatgaagctgacgaaatgctctcccgtggtttcaaggat
cagatctacgacatattccagcttctcccaccgaagatccaggtcggagtgttctcagct
actatgccaccagaggctctcgagatcacgaggaagttcatgagcaaaccggtgagaatc
ttggtgaagcgtgacgagcttactctcgaaggtatcaagcagttctacgtgaacgtggag
aaagaggagtggaagctcgaaactctctgtgacctctacgagacgttagccatcactcag
agtgtcatcttcgtcaacactcgtcgcaaggtggactggctaaccgacaaaatgaggagc
cgtgaccacacggtctcagcgactcacggagacatggaccagaacacgagagacatcatc
atgagagagttcaggtctggttcttcccgtgttctcatcacgaccgatctcttggctcgt
ggtatcgatgtgcagcaagtctctctggtcatcaacttcgacctcccgactcagccggag
aactaccttcaccgtatcgggagaagtggaaggtttgggaggaaaggtgtggcgattaac
ttcgtgactcgtgacgatgagagaatgctttttgatattcagaaattctacaatgtcgtt
gttgaggagcttccctcaaacgtcgccgacctgctttga
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