Raphanus sativus (radish): 108863301
Help
Entry
108863301 CDS
T06014
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108863301
Membrane trafficking [BR:
rsz04131
]
Protein recycling
Others
EARP complex
108863301
Endosome - Golgi transport
Tethering complex
GARP complex
108863301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
XhlA
EXOC6_Sec15_N
DUF7201
MPH2
Motif
Other DBs
NCBI-GeneID:
108863301
NCBI-ProteinID:
XP_018493182
UniProt:
A0A6J0P868
LinkDB
All DBs
Position
5:complement(29333850..29341866)
Genome browser
AA seq
824 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIHGEIRRVDASILSAVRQQSNSGTKAKEDLA
DATRAVEELSYKIQEIKSKAEQSEAMVQEICRDIKKLDFAKKNITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCNHFEAYRDVPKIMELREKLNNIKQVLKSHVFSD
FSSLGTGKETEETNLLQQLSDSCLVVDALESSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPASWHVPYRLCIQFCKKTRKQVESILVNMKEKPEV
ATLLLALQRTVEFEKELEKKFGGDVPTSDIGDDIEEIGTWENNSQNISKIRKKYEKKFAA
GQESGENEKTGNKDLSAPGAGFNFRGIISSCFEPHLTPYTELEEKTLMERLEKVVQEETW
DIEDGSQNNVLHSSTQLFSDIKKSLKRCSVLTKNQTLFNLFKVFQRVLKAYATKLFLKLP
KGGTGIVAAATGMDGQIKVSDKDERVICYIVNSAEYCHKTSGELAEKVSEIIDPHYAEGV
DMSEVQDEFSAVITKSLVTLVLGIETKFDNEMAAMTRVPWGTLDSVGDQSGYVNGINTIL
SGSIPVLGNLLTPVYFQFFLDKLASSLGPRFYANIFRCKQLSETGAQQMLLDTQAMKTIL
LEIPSLARQTSTAASYSKFVSREMSRAEALLKVILSPIDSVADTYRALFPEGTPMEFQRI
LELKGLKKADQQSILDDFNKHGPGLTQPSVSAAMRQPVPTTAAPPMVITNQATAAGFIAN
SEDVLTRAAALGRGAATTGFKKFIALTEAAKDRKDGPLRRLFNA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcgagtgctttagagtatatcaaccagatgttcccaacagaagcatcgcta
tctggcgttgagccgcttatgcaaaagattcatggtgagattcgccgggttgatgctagc
attctatctgctgttcgtcaacagagtaactcgggaactaaagccaaagaagatcttgct
gatgctacgcgtgctgtggaggaactctcctataagattcaagagataaaatccaaagct
gagcaaagtgaagcaatggtgcaagaaatatgccgtgacattaagaagttggattttgca
aaaaagaacattaccaccacgatcactgctcttcatcgtctcacaatgttagtctctgct
gttgaacagcttcaggtgatggcgtcaaaaagacaatacaaggaagcagctgcacagctg
gaggccgtaaaccaattatgtaatcacttcgaagcgtacagggatgttcctaaaatcatg
gaactgagggaaaagcttaataatattaagcaagtcctcaagtcccatgtattttctgat
ttttcgagtttaggtaccgggaaagagacagaggaaacaaatttgctacaacagttatct
gattcttgtttggttgttgatgctttggagtcatctgtcagggaagagttggtaaacaac
ttctgtagccgggagctaacctcatatgaacaaattttcgaaggagctgaattggcaaag
ctggataaaacagagcggagatatgcatggataaagcgtcgaatccgcacaaatgaagaa
atttggaagattttccccgcttcttggcatgtgccttatagactttgcatccagttctgc
aagaaaacaaggaaacaagtagaatctattctggtcaacatgaaagagaaaccagaagta
gcgacattgctactggcactacaaaggacagtggagtttgaaaaggaacttgaaaagaaa
tttggtggtgatgttcctactagtgatatcggagatgacattgaagaaattggtacatgg
gaaaacaatagtcagaatatatccaaaattcgtaagaagtatgaaaagaaatttgctgct
ggtcaagaatccggggaaaatgaaaagaccggaaacaaagatttatctgctcctggagct
gggttcaatttccgtggaattatctcttcttgcttcgaacctcatttaaccccatatact
gagttggaagagaagacacttatggaacgcctggagaaagttgttcaggaggaaacatgg
gatattgaggatggaagtcaaaataatgttttacatagcagcactcagttgtttagcgat
ataaagaagagcttgaaacggtgcagtgttctcactaagaaccagactttattcaatttg
ttcaaggtctttcaacgagttctgaaggcatatgctacaaagctatttcttaagctccca
aaaggaggcaccggtatcgttgctgcagccacaggcatggacggacagataaaggtctcg
gacaaagacgaaagggtgatatgttacattgttaattctgccgagtattgccacaaaaca
tctggtgaattggcagaaaaagtctcagaaattattgacccgcattatgctgaaggcgta
gacatgtcagaggtccaggatgaattttctgctgttataacaaaatcattggtgacgctg
gtccttggaattgaaactaaatttgacaatgaaatggcagcaatgacacgtgttccatgg
ggaacacttgacagtgtgggtgaccagtctgggtacgtgaatggaataaatacaattcta
agcggcagtattcctgtccttgggaacctcttaacaccagtttacttccagtttttcctc
gacaagctggcatcatcccttggaccacggttctatgctaatattttcagatgtaagcaa
ctatccgagactggagctcaacagatgttactagatacgcaagccatgaagacaattctc
ctagaaattccttcccttgctagacagacttcaactgctgccagctattccaaatttgtg
agccgtgaaatgagcagagctgaagcactccttaaggtcatactctccccaatcgattca
gtggctgacacttaccgtgcactgtttccagaaggaactcccatggagtttcagcgcatc
ttggaacttaagggccttaagaaagctgatcagcagagcatacttgatgatttcaacaag
catggcccaggacttacacagccctctgtttcagcggcaatgcgacaaccggttccaacc
acagctgcgccgccaatggtaatcactaatcaggctacggccgctgggttcatagcaaac
agcgaggatgtgttgaccagagcagcggctcttggcagaggagctgcaaccacaggcttt
aagaagttcattgctcttactgaagctgccaaagaccgcaaagatgggcctttaaggaga
ctcttcaacgcttga
DBGET
integrated database retrieval system
