Raphanus sativus (radish): 108863324
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Entry
108863324 CDS
T06014
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108863324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108863324
Spliceosome [BR:
rsz03041
]
Common components
Common spliceosomal components
SR proteins
108863324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_2
CLIP1_ZNF
RRM_occluded
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
108863324
NCBI-ProteinID:
XP_018493212
UniProt:
A0A6J0P8A0
LinkDB
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Position
5:complement(24209229..24211512)
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AA seq
288 aa
AA seq
DB search
MPRFDDRYGNTRLYVGRLSSRTRSRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
RYYLDGRDFDGSRITVEASRGVSLFAPRGSRDGGSRGPPPGSGRCFNCGVDGHWARDCTA
GDWKNKCYRCGERGHIERNCKNSPSPKKARRGGSYSRSPVKSRSPRRRRSPSRSRSYSRG
RSYSRSRSPVRRERSVEDRSLSPKAMERSVSPIGKDQSLSPERRAVDASPKLEKQVGSDY
EASPRENGNGKNSASPIAGGEESPAQDRSPIDDEPELNRSSPKGSESP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatttgatgatcgatatggaaacactcgcctctacgttggccgtttgtcatct
agaactcgcagcagggatcttgagcgtcttttcagcagatacggaagagtacgggatgtt
gatatgaagcgcgactacgcctttgttgaatttagcgatcctcgtgatgctgatgacgca
agatactacttagatggacgagacttcgatggaagtcgcatcactgtcgaggcttccaga
ggggttagtttgtttgctcctcgtggttctcgggacggtggcagcagaggtcctcctcct
ggttctggtcgctgttttaactgtggtgttgatggtcattgggctagagactgcacagca
ggtgactggaagaacaaatgttaccgatgtggtgaaagaggacacattgagagaaactgc
aagaacagtcctagtcctaagaaggccaggcgtggtggaagctactccaggtcaccagtt
aaatcccgctcccctcgccgcagaagaagcccaagccgtagccgtagttacagccgtggt
cgtagctacagccgttcacgatcgccagtgagaagagagagaagcgtggaggatagatca
ctcagtcccaaggcaatggagcgatccgtatctcccataggcaaagaccaaagccttagt
ccagagcgaagagccgtagatgcaagcccaaaactagaaaagcaagttgggtcggactat
gaagccagcccaagggagaatggtaatggcaagaactctgcgagtcctattgcgggaggt
gaagaaagtcctgctcaagacaggagccccattgatgatgagcctgagcttaaccgttct
tcccctaaaggcagcgagtcaccgtga
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