Raphanus sativus (radish): 108863329
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Entry
108863329 CDS
T06014
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 4
KO
K19892
glucan endo-1,3-beta-glucosidase 4 [EC:
3.2.1.39
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00500
Starch and sucrose metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108863329
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rsz00537
]
108863329
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
108863329
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rsz00537
]
Enzymes
108863329
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
DUF5900
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
108863329
NCBI-ProteinID:
XP_018493223
UniProt:
A0A6J0PAW3
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Position
5:complement(5090732..5093382)
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AA seq
502 aa
AA seq
DB search
MMMLPRWFAEAILLLISALAFTNNAAFIGVNIGTDLTNMPPPSDIVTLLKSRQITHIRLY
DANSHMLKAFANTTIQVMVGVTNQEILRIGRFPSAAASWVNKNVAAYVPSTNITAISVGS
EVLSQSPHLAPILASALNNIHKALVATNLNFQVKVSTPMSMDVMPKPFPPSTSTFSPSWN
TTVYQLLQFLDNTGSFFMLNAYPYYGYTTANGIFPLDYALFKQLNPVKQIVDPNTLLHYD
SMFDAMVDAAYYSMEALNFSNIPVVVTETGWPSSGGSDETAATVGNAETFNNNLIKRVLN
NSGPPSQPGIPINTYIYELFNEDKRSGPESEKNWGMFHPNGTSVYPLGLSGGGGGGNSAD
LNGTTLFCVAKADADDDKLEDGLNWACGQGRANCAALQPGQPCYLPNDIKSHASFAYNDY
YQKMKSAGGTCDFDGTAITTPRDPSYRTCAYTGSLNANGTGGNFPPALGPASQVGGNANA
LIVSICHLPFLATLALTLLLVL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgcttccgagatggtttgcagaagcaatcttgcttctaatctcagctcttgct
tttacaaacaacgctgcattcatcggagtaaacataggaacagatctaaccaacatgcca
cccccttcagacatcgtcacactcctcaaatcccgccaaatcacacacatccgtctctac
gacgccaacagccacatgctcaaagccttcgccaacaccaccatccaagtcatggtcggc
gtgaccaaccaagagatcctcagaatcggacgcttcccttcggccgcagcctcctgggtc
aacaaaaacgtcgccgcctacgtcccttccaccaacatcacagccatctccgtcggcagc
gaggtcctctcccaatctccccacctcgctcccatcctcgcatccgctctcaacaacatc
cacaaggccttggtcgccaccaacctcaacttccaagtcaaagtctcaacccctatgtcc
atggacgtgatgcctaaacctttccctccttccacctccaccttcagcccttcctggaac
accacggtctaccagctcctccagttcctcgacaacaccggctccttcttcatgctcaac
gcttacccttactacggctacacgaccgccaacggtatcttcccgctcgattacgcactg
ttcaagcagctcaacccggttaaacagatcgtcgacccaaacacgctactccattacgac
agcatgttcgacgccatggtcgacgctgcttactactccatggaggctctcaacttctcg
aacatccccgtcgtcgtcaccgaaaccggctggccttcttccggtggaagcgacgaaacg
gccgccaccgttggtaacgcggagacgttcaataacaacttgatcaagcgcgtgttgaac
aactccggcccgcctagccagccggggatacctatcaacacgtacatctacgagcttttc
aacgaggacaaaaggtccggaccagagtcggagaagaactgggggatgtttcatcccaac
gggacttctgtctatcctctcggcttaagcggtggcggcggcggcggcaactcagctgat
ttgaacgggacgacgttgttctgcgtggcgaaagctgatgctgatgatgataagttggag
gacggtttgaactgggcttgtggacagggccgagctaactgcgctgcgcttcagccggga
cagccttgttatctaccgaacgatatcaagagccatgcttcttttgcttataatgattat
taccagaagatgaagagtgctggtgggacttgtgactttgatggtactgccatcactacc
cctagagatcctagctatagaacatgtgcttatacgggaagcttaaacgcaaacggaacg
ggaggaaactttcctcctgcgttaggacccgcaagtcaagtgggagggaacgcaaacgca
cttatcgtttctatctgccatcttcccttcttggcaacgttagctctcacgctactacta
gtactgtaa
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