Raphanus sativus (radish): 108863359
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Entry
108863359 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108863359
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108863359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108863359
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rsz03037
]
108863359
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108863359
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108863359
Chromatin remodeling factors
SRCAP complex
108863359
INO80 complex
108863359
INO80 complex (yeast)
108863359
SWR1 complex
108863359
ASTRA complex
108863359
Cilium and associated proteins [BR:
rsz03037
]
Motile cilia and associated proteins
Dynein assembly factors
108863359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_16
ATPase
Sigma54_activat
Mg_chelatase
Zeta_toxin
AAA_25
TiaS_TCKD
nSTAND3
TsaE
AAA_18
SLFN-g3_helicase
Cdc6_lid
ResIII
bpMoxR
AAA_7
GvpD_P-loop
AAA_17
AAA_11
CBFD_NFYB_HMF
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
108863359
NCBI-ProteinID:
XP_018493256
UniProt:
A0A6J0P993
LinkDB
All DBs
Position
5:complement(32363743..32365652)
Genome browser
AA seq
468 aa
AA seq
DB search
MAELKLSESRDLTRVERIGAHSHIRGLGLDSSLEPRAVSEGMVGQAKARKAAGVILQMIK
EGKIAGRAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEALTQSFR
KAIGVRIKEETEVIEGEVVEVQIDRPASSGVASKSGKLTMKTTDMETVYDMGAKLIESLN
KEKVQSGDVIALDKATGKISKLGRSFSRSRDYDAMGAQTKFVQCPDGELQKRKEVVHCVT
LHEIDVINSRTQGFLALFTGDTGEIRSEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENEMSPILVVATNRGVTTIRGTNQKSPHGIPIDLLDRLLIITTQPYT
DEDIRKILEIRCQEEDVEMNEEAKQLLTLIGRDTSLRYAIHLITAAALSCQKRKGKVVEI
EDINRVYRLFLDARRSMQYLVEYQSQYMFSEPVEADGEEEDEQDAMQI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactaaagctatcggagagccgcgacctaacgagagtggagcgaatcggcgcg
cactcacacatccgaggcctaggcctcgactcatccctcgagccgcgagccgtctcggaa
ggaatggtaggccaagcgaaggcgcgcaaagccgccggcgtaatcctccagatgatcaaa
gaaggcaaaatcgccggccgtgccatcctaatcgccggccagccgggaacggggaagacg
gcgatagccatggggatggcgaaatccctcgggttagagacgcccttcgcgatgatcgcg
gggagcgagatcttctccctggagatgtccaagaccgaggctctgactcagtctttccgc
aaagcgatcggggtgaggatcaaggaagagacggaggtgatcgaaggagaagtcgtggag
gttcagatcgataggcctgcttcttccggagtggcgtccaagtcagggaagctgacgatg
aagacgacggatatggagacggtttacgatatgggggcgaagctgattgagtctttgaat
aaggagaaagtgcagagcggggatgtgattgcgcttgataaggcgactgggaagattagt
aagctcgggaggtcgttttcgaggtctagggattatgatgcgatgggtgcgcagactaag
ttcgtgcagtgccctgatggtgagttgcagaagaggaaagaggttgtgcattgtgtcact
cttcatgagattgatgtcatcaacagcaggacgcaagggtttctagcccttttcactgga
gatactggagagatccgatcagaagttcgtgaacaaatcgacacaaaagtagcggaatgg
agagaagaaggcaaagctgagatagttcctggcgttctcttcatcgacgaagtccacatg
ctcgacattgaatgcttctcattcctcaaccgagccctcgagaacgaaatgtcaccgatc
ctcgtcgtggcaaccaaccgaggagtcacgacgatccgcgggacgaaccagaaatcaccc
cacgggatcccgatcgatctcctcgaccgtctcctcatcatcacaactcagccttacacg
gacgaggacataaggaagatcttggagattcgttgccaagaagaggacgtcgagatgaac
gaggaggccaagcagcttttgactttgatcggacgtgatacttctctgaggtatgcgatt
catctgattacggccgctgcgttgtcttgccagaaacggaaagggaaagtcgtggagatt
gaggatatcaacagagtttatcgattgttcttggatgcgaggagatcgatgcagtacctc
gtcgagtatcagagtcagtatatgtttagcgaaccagtcgaagctgatggagaagaagaa
gacgaacaagatgctatgcaaatctga
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integrated database retrieval system
