KEGG   Raphanus sativus (radish): 108863393
Entry
108863393         CDS       T06014                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 1
  KO
K12195  charged multivesicular body protein 6
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03250  Viral life cycle - HIV-1
rsz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108863393
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108863393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108863393
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108863393
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108863393
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108863393
  Exosomal proteins of other body fluids (saliva and urine)
   108863393
SSDB
Motif
Pfam: Snf7 TINF2_N FUSC DUF7750 CesT_Tir_1 DUF1269
Other DBs
NCBI-GeneID: 108863393
NCBI-ProteinID: XP_018493307
UniProt: A0A6J0P8K0
LinkDB
Position
5:complement(33292755..33294495)
AA seq 219 aa
MGNMFVKKPQITDVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIRENRKERALL
ALRKKRTQEDLLKQVDQWVINVEQQLADIELTSKQKAVFESLKQGSSAIKAIQSEVDLDD
VQKLMDDTADAKAYQDELNAILGEKLSAEDEEEILAEFDNLESQLAVDEMPDVPTTEPQE
SEKIDLPDVPTRKPIASNAEITPAESATKRKVLEEPLPA
NT seq 660 nt   +upstreamnt  +downstreamnt
atggggaatatgttcgtgaagaaaccacagatcacggacgttgatcgagccattctctct
ctcaaaacccagagacgcaagctcggccaataccagcagcagcttgagaaagtaatagaa
gctgagaagcaagctgcaagagacttaatccgagaaaatagaaaggagagggctttgtta
gcactgaggaagaaacggacgcaagaagacttgttgaagcaagttgatcaatgggtcatc
aatgttgaacagcaattggcagatattgaacttacgagcaagcaaaaggccgtgtttgag
agcttaaagcagggtagcagtgctattaaagccattcaaagcgaagtggatcttgatgat
gttcaaaagcttatggatgataccgctgatgctaaagcctatcaagatgagttgaatgct
attttgggagagaaactatcagcagaggatgaagaagagatattagcagaatttgacaac
ctagaaagtcagcttgctgttgatgagatgcctgatgtgcctacaacggagccccaagaa
tctgagaagatagatcttccagatgtgccaacgagaaaacccatcgcttccaatgctgaa
atcacaccagctgaatcagccacaaagagaaaagttctcgaagaacctttgccagcttga

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