Raphanus sativus (radish): 108863441
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Entry
108863441 CDS
T06014
Name
(RefSeq) transcription factor IIIB 60 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108863441
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108863441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Peptidase_S77
Talin_VBS2
Motif
Other DBs
NCBI-GeneID:
108863441
NCBI-ProteinID:
XP_018493367
UniProt:
A0A6J0P8R1
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Position
5:38334242..38338776
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AA seq
608 aa
AA seq
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MVWCNHCGKNVSGIRPFDGALACDLCGRILENFNFSTEVTFVKNAAGQSQASGNVVRSIQ
SGVSSSRERRIRLARDEFMNLRDGLGLGDERDDIIDMATRFFTVAVEQNFTKGRRTELVQ
CSCLYLTCREMNIPFLLIDFSSYLRVSVYELGAVYLQLCEMLYIAENRNYEKLVDPSIYI
PRFTNVLLKTQDKDVVRTARDIIASMKRDWIQTGRKPSGICGAALYTAALAHGIKCSKTD
IVGIVHICEATLTKRLNEFGDTEAGSLNIDELKEREEEMHKRSFATKQTSNKETVHCAHQ
DCKPVNYGLCEDCYRDFITVSGGLVGGSDPPAFQRAEKERMEKEKAAREENEGGISSLNH
DEQLNAKREPVYSSVSKSAKPCSEKGEGEKDEDDGEVSDESGNFSDVSDTEVDCYINNEE
ERRYKKMVWEEMNKEYIKEQADKEAALKAANDALNASSSNLPEHARKLVEASKAAVAKSR
KEKQQKRAEEEKNLPPPATATEAVRRMLDKKRLSALINYDLLDELLDTSPSEKPAKISRT
ETVMEKTKEEKKEVKSTKQEDGENEDEGEEDEEDYVESYDINTDFPDGEKLYEEEDEEEE
DGYDFGLY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtgtaaccattgtgggaagaacgtttccgggatacgccccttcgatggtgca
cttgcgtgtgatttatgcggaaggattttggagaatttcaacttttcaactgaagttaca
ttcgttaagaatgctgctgggcagagtcaagcgtcaggtaacgtagtgagaagtattcag
agtggggtttcaagctcacgtgaaaggagaattagactagctagagatgagtttatgaat
ttgagagatggcttgggacttggtgatgagagagatgatattattgacatggctactcga
ttctttacagtggcagttgagcaaaatttcactaagggccggagaactgaactagtacaa
tgttcctgtctctacttgacttgcagggaaatgaacataccgtttcttcttattgatttc
tcaagctaccttcgagttagcgtttatgagttaggtgctgtgtacttgcaactctgtgaa
atgctgtacattgccgaaaaccggaattatgaaaagcttgttgatccttcaatctatata
cctcggttcacaaacgtcttattgaagacacaagataaagatgtcgtgagaacagctaga
gacattatagctagtatgaagagagattggatacagaccggccggaaacctagtggaata
tgcggagcagcgctctacacagctgcgcttgcccatggtatcaagtgctctaagacagat
attgtaggcattgtgcatatatgtgaagcaactctaacaaaaaggttgaatgagtttgga
gatactgaggctggaagtttaaatattgacgaactcaaagagagagaagaggaaatgcat
aaaagatcttttgccacgaagcagacgtctaacaaagagaccgtgcactgtgcgcatcag
gattgcaagcctgttaactatggactatgtgaggactgttaccgcgatttcataactgtt
tccggaggacttgttggtgggtcggatcctcctgctttccagcgagcagagaaagagaga
atggaaaaagaaaaggcagctagagaagaaaatgaaggagggattagtagcctaaaccat
gatgaacaactgaatgccaagagagaaccagtctactccagtgtgagcaaaagtgcaaaa
ccatgttcagagaaaggtgaaggagagaaagatgaggatgatggtgaagtttcagatgaa
tcaggcaacttttctgacgtcagtgatactgaggtggattgctacattaataacgaggaa
gaaaggcgatataagaagatggtatgggaagaaatgaacaaagagtatattaaggagcaa
gcagataaggaagctgctctgaaggcggctaatgatgctttaaacgcgagcagctctaat
ttgccagaacatgcaagaaagcttgttgaagcttctaaagctgccgtagcaaaatctaga
aaggaaaagcaacaaaaacgagctgaggaagaaaagaacttgcctcccccagcaaccgcc
acggaagctgttcgcagaatgcttgataaaaagaggcttagtgcgttaatcaactacgat
cttttggacgagctcttggatacatctccatctgagaaaccagccaagatttcaagaacc
gagacagtcatggaaaagacgaaggaagagaagaaggaagtgaagagcactaaacaagaa
gatggtgaaaatgaagacgaaggtgaagaggatgaagaagactatgtggaatcatacgac
ataaacacagactttccagacggtgagaaactctatgaagaggaagatgaagaagaagag
gatggttatgattttggactatattga
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