Raphanus sativus (radish): 108863447
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Entry
108863447 CDS
T06014
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108863447
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
108863447
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108863447
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
DUF1195
PAP_PilO
Motif
Other DBs
NCBI-GeneID:
108863447
NCBI-ProteinID:
XP_018493378
UniProt:
A0A6J0PBD0
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Position
5:39652532..39655574
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AA seq
552 aa
AA seq
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MCKAEKSLYQRKLWEMKVKFLGGGDSSKIDKFKNSLVSKSRMSLWMIRAMTVLLLWSCFV
HLVAVGGMWGPRLLKGWPSCFNHHHDFPMAAAAQELASLPIKIALPPKRIYHNNGYLMVS
CNGGLNQMRAAICDMVTIARYMNVTLIVPELDKTSFWNDPRLLLLLLLPSISHSELLLLL
LKVVDGCSYVSSEFKDIFDVDHFITSLRDEVRILKEVPPRLKRRVELGVYHTMPPISWSN
MSYYQDQILPLVKKHKVLQLNKTDTRLANNELPVEVQKLRCRVNFNGLRFTPKIEELGRR
VVKILREKGPFLVLHLRYEMDMLAFSGCSHGCNRYEEEELTRMRYAYPWWKEKVIDSELK
RKEGLCPLTPEETALTLSALGIDRNVQIYIAAGEIYGGKRRLKVLTDVFPNVVRKETLLD
SSDLSFCKNHSSQMAALDYLISLESDIFVPTYYGNMAKVVEGHRRFLGFKKTIELNRKFL
VNLIDEYYQGMLSWEVFSTTVKAFHATRMGGPKKRLVIPNRPKEEDYFYANPYECLQLLH
ENENADSVDETK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaagcggagaagtctctataccagaggaagctgtgggagatgaaggttaagttc
ctaggaggaggagatagcagcaagattgacaagttcaagaactcccttgtttccaagtct
cgtatgagcctttggatgattcgtgctatgaccgtattgttgctatggagctgttttgtt
catttggtggcagtgggagggatgtggggaccaagattgttgaaaggctggccttcttgt
ttcaatcaccatcatgacttcccaatggctgctgctgcacaagaattggcttctcttccc
atcaaaatagccctccctcctaaaaggatatatcacaacaatggctatcttatggtttct
tgcaatggaggactcaaccaaatgcgagctgcgatatgtgatatggtgactattgcaaga
tacatgaatgtcacacttatagtcccggagcttgacaagacctctttctggaacgatcca
aggttattattattattattattgccatccatctctcactcagagcttcttttgcttctc
ttgaaagttgttgatgggtgttcttatgtgagcagtgagttcaaagacatattcgatgtg
gatcacttcataacttctttgagagatgaagttcgtatacttaaagaggttcctccaagg
cttaagagaagggttgagctcggtgtataccacaccatgcctcctatcagctggtccaac
atgtcctactaccaagaccagattcttcccttggtgaagaagcataaggtcttacaactg
aacaagaccgatactcgacttgctaataacgaactccctgttgaggtccagaagctgaga
tgcagagtaaacttcaacgggctcaggtttactccaaagattgaggaactaggtagaaga
gtagtcaagattctgagggagaaaggtccctttctggttctccatctcagatacgaaatg
gatatgttggccttctctggttgctcccatggttgcaaccgctacgaagaggaagagctc
acaagaatgagatatgcttatccatggtggaaggagaaagtaatagactcagagttgaag
aggaaagaaggtctttgtccactgactccagaagaaacagctctgacactatctgccttg
gggattgaccgtaatgttcagatttacatagctgcaggagagatatacggtggtaaaagg
aggttaaaggttttaacagacgtctttccaaatgtggtgaggaaagaaactctgcttgat
tcttctgatttgagtttctgtaagaaccattcttctcaaatggctgctcttgattacctc
atctctctcgaaagtgacatattcgttcctacttattatgggaacatggctaaagtcgtg
gaaggtcatcgcaggttcttggggttcaagaaaacgattgagctaaacaggaagtttttg
gttaatctaatagatgaatactaccaaggaatgttgagctgggaagtgttttcgaccacg
gtgaaggcctttcacgctacaagaatgggaggtcccaagaagcggcttgtgattcctaat
agacctaaagaagaagactacttctatgctaatccatacgaatgtcttcagctgttacat
gagaatgaaaatgctgattcagttgatgaaaccaaatga
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