Raphanus sativus (radish): 108863477
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Entry
108863477 CDS
T06014
Name
(RefSeq) two-component response regulator ARR1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108863477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108863477
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108863477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
108863477
NCBI-ProteinID:
XP_018493413
UniProt:
A0A6J0PBG5
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Position
5:complement(36386210..36389542)
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AA seq
646 aa
AA seq
DB search
MMMNPLNGRGGGGLGSSSGKNQGGESVVEMFPSGLRVLVVDDDPTCLVILEKMLRTCLYE
VTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKS
VVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRIEWSMPTTTHSGSVEETTGERQQQQ
QREAVSADDDDNNSSSVNEGNNNNNNNWRSSSGSSSRKRKDEEGEEEQGDEEDASNLKKP
RVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGV
SQHHQGSLNNSFMTTGQDASFCSLPTLNGFDLQALGQLPAQSLAQLQASGLTRPAALVSK
PGFPGGSTTIVDERSIFSFDNSKMNLLHGVPTGMEPRQLAGLQQEHRMTIQQQIAAVRAG
HSLRMPQQQTFSRPQQSSSIRQPMLPNRVSEISGFSSGRSSSIPESSSRVLPTSYANLST
QQQSLAFSNFQQELPVNSFPLASAPGLLSLRKPHSSASEVNSSAAGFTTSSYDMLFSSRQ
NDWDLRSMLSSSHQDAFSNSEAYSSSRNNNNTSRNQQQPPQGMVSHHQVYGNGGGSSLKV
KSETMAFHEQYSNQEDLMSALLKQEGIGPVDTEFDFDAYSIDDIPV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaatcctcttaacggaagaggaggaggaggactcggatcgagttcgggtaag
aatcaaggcggtgagtcagtggtggagatgtttccctcgggtcttagagttcttgtcgtt
gacgatgacccgacttgtcttgtgatcttagagaagatgctcaggacttgtctttacgaa
gtaacgaaatgcaacagagcagagatggcattgtctctgctccgaaagaacaaacatgga
ttcgatattgtcatcagcgatgttcacatgcctgacatggacggcttcaagctccttgaa
catgtcggtcttgagatggacttgcctgttatcatgatgtctgcggatgattcaaagagt
gttgtcctaaaaggagtcacgcacggcgcggttgactacctaatcaaacctgtacgtatg
gaggcgctcaagaacatatggcagcacgtggttcggaagaggaggatcgagtggagcatg
cctactactacacattccggaagcgttgaggagacaaccggcgagaggcagcagcagcag
cagagagaagctgtttccgctgacgatgatgacaacaactcttcctctgtcaacgaaggg
aataataacaacaacaacaactggaggagcagcagcggcagcagctcgcggaagcggaaa
gacgaggaaggtgaagaagagcaaggtgacgaggaagacgcttccaatctcaagaagccg
cgtgttgtctggtccgttgagttgcatcaacagtttgttgctgctgttaatcagctcggc
gtcgaaaaggcggttcctaagaagatattggagctgatgaatgttcctggtcttaccagg
gagaacgtagccagccacctccagaaatacagaatatatctaagacggcttggaggagtg
tcacagcaccaccaaggcagtttaaacaactcgtttatgacgacgggtcaggacgcgagc
ttctgttctcttccgactctaaatgggtttgatcttcaagcgctaggtcagcttcctgca
cagagccttgcacagcttcaagcatctggtctaacccggcctgctgcgttggtctctaag
ccagggttccctggtggttccaccaccattgtggacgagagaagcatcttcagcttcgac
aactccaaaatgaacttgctccacggtgtcccgaccggtatggaaccaagacagcttgct
ggcttacaacaagaacatcgaatgacgattcaacaacagattgccgctgtaagagcagga
catagccttcggatgcctcagcagcaaacattctcacgaccacaacaatcatcatccatc
aggcagccgatgttaccaaaccgtgtctctgagataagtggtttctcttcgggaaggagc
agcagtatccctgagagcagcagcagagtgttacccacaagctatgccaacctctcaact
caacaacagtcgctggccttcagcaacttccaacaagaactccccgtgaacagcttcccg
ctagcgagtgcaccaggcttattatctcttcggaaaccacattcttctgcttccgaggtt
aacagctcggcagcaggtttcaccacatctagctacgacatgttgttctcaagtagacag
aacgattgggatctgcggagtatgctttcttcctctcatcaagacgcgttttccaattca
gaagcctactcttcttcaagaaacaacaacaacactagccggaaccagcagcagccaccg
cagggcatggtctcgcatcaccaggtttatggaaacggagggggaagctccctgaaggtg
aagtcagagacgatggcgttccacgagcagtatagtaatcaagaagatcttatgagcgca
cttcttaagcaggaaggtattggaccggttgataccgagttcgactttgatgcgtactcg
attgatgacatcccggtttga
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