Raphanus sativus (radish): 108863519
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Entry
108863519 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 11
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108863519
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108863519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
NRIP1_repr_2
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108863519
NCBI-ProteinID:
XP_018493474
UniProt:
A0A6J0P9Z6
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Position
5:complement(37327087..37330130)
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AA seq
506 aa
AA seq
DB search
MMSKDILLHQQVQQQQQENMSNLTSASGDQTSVSSGNRTEASGSNYFPHHQQQEQQQFFV
PESQPQKKRRNQPGNPDPESEVISLSPKTLMATNRFVCEICNKGFQRDQNLQLHKRGHNL
PWKLKQRPNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSK
KYAVQSDCKAHSKTCGTKEYRCDCGTIFSRRDSFITHRAFCEALGKETAREVVIPENYNH
QPNPILISQSTFHHQHDQAQPNMNVSSPSHNIINNLHFKTNNNGTNNSNSSSNHLSTFPV
KKEQQQSSDHIISYHHQSIPPWLAPQPQDLTFSNRNPSNGGGGLFSLAASPAMSATALLQ
KAAQMGSTRSPRLPPTTDFERSAHHNNLMTTTMAAMMTSPSGFISSNNNNQVMFQGYNPS
VFDHHGGEEAFDDTFSAFLRTPADTTTAGSDKKKSGGGGGVGEGLTRDFLGLRPLMSHNE
MLSFAGLGNCISGAASDQLHPKPWQG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaaagatatcttacttcatcagcaagtgcaacaacaacaacaagagaatatg
tcgaatttaacatcagcttctggggatcaaacaagtgtctcttcaggaaacagaactgaa
gcaagtggttctaattacttccctcatcatcaacaacaagaacaacaacagttctttgtt
cctgaatctcagcctcagaagaagaggaggaaccaaccagggaatccagacccggaatca
gaagtgatttctttatcaccaaaaacactaatggcaacaaacagatttgtttgtgagatc
tgcaacaaaggattccaaagagaccagaatctacagcttcataagagaggtcacaatcta
ccatggaagctgaaacaacgacccaacaaagaagtgataaggaaaaaagtgtatgtttgt
ccagaagcaagctgtgtacaccatgacccgtctcgagctctaggtgacttaactggaatc
aagaagcatttcttcagaaagcatggagagaagaagtggaaatgtgacaaatgttcaaag
aaatatgctgttcagtcagattgcaaggcccattctaagacctgtggcaccaaagaatac
agatgtgactgtggaactatcttttctaggagggatagtttcataactcatagagcattt
tgtgaagcattgggtaaagagactgcacgagaagttgtaataccagaaaactataatcat
caaccaaaccctattttgattagccaatctacttttcatcatcaacatgatcaagcacaa
ccaaacatgaacgtctcttccccttcccacaacatcatcaataaccttcacttcaaaacc
aacaacaatggtactaacaatagtaacagtagcagcaaccatctctctacatttccagtg
aagaaagagcaacaacaaagtagtgatcatatcattagttaccaccaccaaagcatccct
ccttggcttgcgcctcagccgcaagatctcacattttcaaaccgtaaccctagtaacggt
ggaggaggtttgttctctcttgcagcttctccagctatgtcagccaccgcattgctccag
aaagcagcccaaatgggttccaccaggtcacctcgtttaccaccaaccacagacttcgag
aggtcagctcatcataacaacctcatgaccacgacaatggcggcaatgatgacgtcgcca
tctggattcatcagctccaacaacaacaatcaagttatgtttcaaggctacaacccctcc
gtgtttgatcaccacggtggagaagaagccttcgacgacacattcagcgcgttcttgagg
acacccgctgatactacaaccgcaggttcagacaagaagaaaagcggtggaggcggtgga
gtaggagaaggtttgacgagagacttcttggggctaagaccgttaatgtctcataacgag
atgctaagttttgccggtctcgggaattgcatcagtggtgctgcttctgatcagcttcat
ccaaagccttggcagggttag
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